RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SOAT2O75908 522 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 GRIA3P42263 894 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 TRIM28Q13263 835 aaKnown RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SCN4BQ8IWT1 228 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 C19orf60Q96EN9 201 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SMAD5Q99717 465 aaKnown RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 RIBC2Q9H4K1 309 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 KLHL31Q9H511 634 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 PCDH12Q9NPG4 1184 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 GPATCH2LQ9NWQ4 482 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 FBXO40Q9UH90 709 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 CARD8Q9Y2G2 431 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 COQ6Q9Y2Z9 468 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 LOC100506127A0A0U1RQW1 187 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 PGK2P07205 417 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 KRT20P35900 424 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 TALDO1P37837 337 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 PSEN1P49768 467 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 MYBPC2Q14324 1141 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 MFSD7Q6UXD7 560 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 C11orf74Q86VG3 221 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 RNF149Q8NC42 400 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 BAP1Q92560 729 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 PPP1R10Q96QC0 940 aaKnown RBP12.41□□□□□ -0.42
COL12A1-202ENST00000345356 GIN1Q9NXP7 522 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 A2ML1A8K2U0 1454 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 IREB2P48200 963 aaKnown RBP12.41□□□□□ -0.42
COL12A1-202ENST00000345356 GSSP48637 474 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 COX10Q12887 443 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 ZIK1Q3SY52 487 aaPredicted RBP12.41□□□□□ -0.42
COL12A1-202ENST00000345356 SPDYE7PQ495Y7 208 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 LINC00523Q86TU6 105 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 TRABD2AQ86V40 505 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 SLC25A23Q9BV35 468 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 PREBQ9HCU5 417 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 ARHGEF3Q9NR81 526 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 ADAM30Q9UKF2 790 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 MKL2Q9ULH7 1088 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 PRR5-ARHGAP8B1AHC4 643 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 MTSS1O43312 755 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 ASMTLO95671 621 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 LRPAP1P30533 357 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 ARHGAP8P85298 464 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 CSHL1Q14406 222 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 FAM47BQ8NA70 645 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 SLC35C1Q96A29 364 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 COA1Q9GZY4 146 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 TBX20Q9UMR3 447 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 UNC13AQ9UPW8 1703 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 KRT6AP02538 564 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 FAM86B2P0C5J1 330 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 GP5P40197 560 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 TAB1Q15750 504 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF570Q96NI8 536 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 MED15Q96RN5 788 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 KRT84Q9NSB2 600 aa12.41□□□□□ -0.42
COL12A1-202ENST00000345356 EFCAB10A6NFE3 127 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 CRKP46108 304 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 GRM1Q13255 1194 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 PDK2Q15119 407 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 CACHD1Q5VU97 1274 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 BPIFB6Q8NFQ5 453 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 SLC4A5Q9BY07 1137 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 LATS2Q9NRM7 1088 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 A0A096LPK6 155 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 ETS1P14921 441 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 AKR1D1P51857 326 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 DLG4P78352 724 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 C1DQ13901 141 aaKnown RBP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 THOC7Q6I9Y2 204 aaKnown RBP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 PIGWQ7Z7B1 504 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 UTP15Q8TED0 518 aaKnown RBP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 HTRA1Q92743 480 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 KAZALD1Q96I82 304 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 TAS2R14Q9NYV8 317 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 USP18Q9UMW8 372 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 TM7SF2O76062 418 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 PRKCIP41743 596 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 SEC23AQ15436 765 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 RC3H1Q5TC82 1133 aaKnown RBP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 RBM15BQ8NDT2 890 aaKnown RBP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 PABPC5Q96DU9 382 aaKnown RBP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 MARK4Q96L34 752 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 MBOAT7Q96N66 472 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 QKIQ96PU8 341 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 UBE2OQ9C0C9 1292 aaKnown RBP12.4□□□□□ -0.42
COL12A1-202ENST00000345356 EPB41L1Q9H4G0 881 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 ANAPC2Q9UJX6 822 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 PSMD13Q9UNM6 376 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 WDR27A2RRH5 827 aa12.4□□□□□ -0.42
COL12A1-202ENST00000345356 BTN3A3O00478 584 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms