RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TMA7Q9Y2S6 64 aaKnown RBP18.54■□□□□ 0.56
SMC4-201ENST00000344722 S100A1P23297 94 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 RPL14P50914 215 aaKnown RBP18.54■□□□□ 0.56
SMC4-201ENST00000344722 EPS8Q12929 822 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 BROXQ5VW32 411 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 BNIPLQ7Z465 357 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 PIGWQ7Z7B1 504 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 TTC7BQ86TV6 843 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 PPP1R14BQ96C90 147 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 HPDLQ96IR7 371 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 TMEM165Q9HC07 324 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 S100A14Q9HCY8 104 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 CACNA2D2Q9NY47 1150 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 RNF112Q9ULX5 631 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 SLC12A4Q9UP95 1085 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 RAD54BQ9Y620 910 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 BIRC5O15392 142 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 BNIP3LO60238 219 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 NPTX2P47972 431 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 PSMC6P62333 389 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 BST1Q10588 318 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 TRIP4Q15650 581 aaPredicted RBP18.54■□□□□ 0.56
SMC4-201ENST00000344722 OTULINQ96BN8 352 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 ASIC4Q96FT7 647 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 PRPF4O43172 522 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMC4-201ENST00000344722 CCT8P50990 548 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 GALK1P51570 392 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 MAPK10P53779 464 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 COLGALT1Q8NBJ5 622 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 TAS2R14Q9NYV8 317 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 H2AFY2Q9P0M6 372 aaPredicted RBP18.54■□□□□ 0.56
SMC4-201ENST00000344722 POLD3Q15054 466 aaPredicted RBP18.53■□□□□ 0.56
SMC4-201ENST00000344722 ALLCQ8N6M5 410 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 ABHD8Q96I13 439 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 WRNIP1Q96S55 665 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 USE1Q9NZ43 259 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 A0A096LPK6 155 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 NR3C2P08235 984 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 GRM1Q13255 1194 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 TMEM26Q6ZUK4 368 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 PRPF19Q9UMS4 504 aaKnown RBP18.53■□□□□ 0.56
SMC4-201ENST00000344722 WDR27A2RRH5 827 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 LIASO43766 372 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 MAGEC1O60732 1142 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 CCNA2P20248 432 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 ZNF846Q147U1 533 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 GALNTL6Q49A17 601 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 UGT2B28Q9BY64 529 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 GPATCH2LQ9NWQ4 482 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 ADAM30Q9UKF2 790 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 CAPN1P07384 714 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 MAPRE1Q15691 268 aaKnown RBP18.53■□□□□ 0.56
SMC4-201ENST00000344722 RINLQ6ZS11 566 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 FAM9CQ8IZT9 166 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 C8orf59Q8N0T1 100 aaPredicted RBP18.53■□□□□ 0.56
SMC4-201ENST00000344722 PABPC5Q96DU9 382 aaKnown RBP18.53■□□□□ 0.56
SMC4-201ENST00000344722 VANGL2Q9ULK5 521 aa18.53■□□□□ 0.56
SMC4-201ENST00000344722 APOC4-APOC2K7ER74 178 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 VWA5AO00534 786 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 TRIM38O00635 465 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 CHADO15335 359 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 BAIAP3O94812 1187 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 NTSR2O95665 410 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 APOC2P02655 101 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 GJA8P48165 433 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 LRRC74AQ0VAA2 488 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 DDR2Q16832 855 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 MRNIPQ6NTE8 343 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 HHIPL2Q6UWX4 724 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 SP8Q8IXZ3 490 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 RBM46Q8TBY0 533 aaKnown RBP18.52■□□□□ 0.56
SMC4-201ENST00000344722 FSCN2O14926 492 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 MAP3K13O43283 966 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 PDE9AO76083 593 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 FGFR3P22607 806 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 VAC14Q08AM6 782 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 UBAP2LQ14157 1087 aaKnown RBP18.52■□□□□ 0.56
SMC4-201ENST00000344722 CBWD6Q4V339 395 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 CBWD3Q5JTY5 395 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 CBWD5Q5RIA9 395 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 STK32CQ86UX6 486 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 RP9Q8TA86 221 aaKnown RBP18.52■□□□□ 0.56
SMC4-201ENST00000344722 AFG1LQ8WV93 481 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 ARHGEF3Q9NR81 526 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 SLC30A1Q9Y6M5 507 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 ADGRB1O14514 1584 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 PGK2P07205 417 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 PDGFRBP09619 1106 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 CCDC166P0CW27 439 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 IER5Q5VY09 327 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 HDDC2Q7Z4H3 204 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 ALYREFQ86V81 257 aaKnown RBP18.52■□□□□ 0.56
SMC4-201ENST00000344722 PHF21AQ96BD5 680 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 DENND2DQ9H6A0 471 aaPredicted RBP18.52■□□□□ 0.56
SMC4-201ENST00000344722 GPRC5CQ9NQ84 441 aa18.52■□□□□ 0.56
SMC4-201ENST00000344722 ARIH1Q9Y4X5 557 aaPredicted RBP18.52■□□□□ 0.56
SMC4-201ENST00000344722 RGSL1A5PLK6 1076 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 SNTNA6NMZ2 147 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms