RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 CFAP36Q96G28 342 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 TSPAN18Q96SJ8 248 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 CRTAC1Q9NQ79 661 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 TMEM30AQ9NV96 361 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 DTLQ9NZJ0 730 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 SENP1Q9P0U3 644 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 ST3GAL5Q9UNP4 418 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 TDRD15B5MCY1 1934 aaKnown RBP13.15□□□□□ -0.3
RNF13-201ENST00000344229 UBOX5O94941 541 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 CHRNA1P02708 482 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 APRTP07741 180 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 VAV1P15498 845 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 GRIA1P42261 906 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 MAGEA6P43360 314 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 SULT1E1P49888 294 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 SLC8A3P57103 927 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 YWHAGP61981 247 aaKnown RBP eCLIP13.15□□□□□ -0.3
RNF13-201ENST00000344229 MRPS5P82675 430 aaKnown RBP13.15□□□□□ -0.3
RNF13-201ENST00000344229 MRPS6P82932 125 aaKnown RBP13.15□□□□□ -0.3
RNF13-201ENST00000344229 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 DCAF6Q58WW2 860 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 SLC45A4Q5BKX6 768 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 CXCL17Q6UXB2 119 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 STRADAQ7RTN6 431 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 BNIPLQ7Z465 357 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 ANKLE1Q8NAG6 615 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 SERAC1Q96JX3 654 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 GAD1Q99259 594 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 PITPNM3Q9BZ71 974 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 TIMM13Q9Y5L4 95 aaPredicted RBP13.15□□□□□ -0.3
RNF13-201ENST00000344229 SYNJ2BP-COX16A0A087WUM0 186 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 CFAP69A5D8W1 941 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 MANSC4A6NHS7 340 aaPredicted RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 CXorf49A8MYA2 514 aaPredicted RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 SUN1O94901 812 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 TSHRP16473 764 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 NPR3P17342 541 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 CLCNKBP51801 687 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SPARCL1Q14515 664 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 PDK4Q16654 411 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SLC5A9Q2M3M2 681 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 EFHC1Q5JVL4 640 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 ZNF276Q8N554 614 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 FITM2Q8N6M3 262 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 BANPQ8N9N5 519 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 NT5C3BQ969T7 300 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 FAM149B1Q96BN6 582 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 CYTH2Q99418 400 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 COX16Q9P0S2 106 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 NUP205Q92621 2012 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 HTTP42858 3142 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 NRP1O14786 923 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 GCATO75600 419 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 PGK1P00558 417 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 AMHP03971 560 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 FYNP06241 537 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 CTSHP09668 335 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 GNAT1P11488 350 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 ADRA1DP25100 572 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 MAP3K7CLP57077 242 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 GALNTL6Q49A17 601 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SH2D5Q6ZV89 423 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 MPP5Q8N3R9 675 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 MAGEC3Q8TD91 643 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SMYD2Q9NRG4 433 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 FAM105AQ9NUU6 356 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 ARL2BPQ9Y2Y0 163 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SHROOM3Q8TF72 1996 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 F5H423 210 aaPredicted RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 DGKIO75912 1065 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 DNAJC8O75937 253 aaPredicted RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 AKR1A1P14550 325 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 DESP17661 470 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 XRCC4Q13426 336 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 GNASQ5JWF2 1037 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 GPRIN1Q7Z2K8 1008 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 CDKL3Q8IVW4 592 aaPredicted RBP13.14□□□□□ -0.31
RNF13-201ENST00000344229 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
RNF13-201ENST00000344229 OLFM3Q96PB7 478 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms