RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 WDR12Q9GZL7 423 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 IFT122Q9HBG6 1241 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 XAB2Q9HCS7 855 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 ALG13Q9NP73 1137 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TRMT112Q9UI30 125 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 DAPK2Q9UIK4 370 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 CNTNAP4Q9C0A0 1308 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PRSS51A0A1B0GVH4 220 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 KRBA1A5PL33 1030 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TRIM64BA6NI03 449 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 E5RJQ4 531 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 GOLGA8RI6L899 631 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 M0QX08 132 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 SLC22A2O15244 555 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PROSCO94903 275 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ITGAVP06756 1048 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 SNRPAP09012 282 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 FDX1P10109 184 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 P4HA1P13674 534 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ENDOUP21128 410 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 NMT1P30419 496 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PTPN7P35236 360 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 HOXD13P35453 343 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 IREB2P48200 963 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 DMPKQ09013 629 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF846Q147U1 533 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 EFTUD2Q15029 972 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 OXA1LQ15070 435 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 KCNJ8Q15842 424 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ABCB5Q2M3G0 1257 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 SLC35G1Q2M3R5 365 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ANKDD1AQ495B1 522 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CBWD6Q4V339 395 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CAVIN4Q5BKX8 364 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CBWD3Q5JTY5 395 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TCHHL1Q5QJ38 904 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CBWD5Q5RIA9 395 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 STXBP5Q5T5C0 1151 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TEDDM1Q5T9Z0 273 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ANGEL2Q5VTE6 544 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PLEKHA7Q6IQ23 1121 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 NANOGP8Q6NSW7 305 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 BNC2Q6ZN30 1099 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CAPN12Q6ZSI9 719 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 SAMD7Q7Z3H4 446 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CTU1Q7Z7A3 348 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 HPS6Q86YV9 775 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 FAM71AQ8IYT1 594 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF444Q8N0Y2 327 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TTC30BQ8N4P2 665 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 LILRB4Q8NHJ6 448 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 HAS1Q92839 578 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 NACC2Q96BF6 587 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 RMDN3Q96TC7 470 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TMEM47Q9BQJ4 181 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 DCUN1D5Q9BTE7 237 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 EHD1Q9H4M9 534 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CAAP1Q9H8G2 361 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PSTPIP2Q9H939 334 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CYP4F11Q9HBI6 524 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ATP11BQ9Y2G3 1177 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PLLPQ9Y342 182 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TIMM22Q9Y584 194 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 BAZ2BQ9UIF8 2168 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF831Q5JPB2 1677 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ANKRD34BA5PLL1 514 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 NOTOA8MTQ0 251 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TBX3O15119 743 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CLIC2O15247 247 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TGFB1I1O43294 461 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 FAM13AO94988 1023 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PROZP22891 400 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PPP4CP60510 307 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 FMO1Q01740 532 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TRIM71Q2Q1W2 868 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 Q3C1V9 767 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 RALGPS1Q5JS13 557 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 LIN9Q5TKA1 542 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PDPK2PQ6A1A2 396 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF280DQ6N043 979 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF746Q6NUN9 644 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 SLC26A11Q86WA9 606 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF677Q86XU0 584 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 RCOR2Q8IZ40 523 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 FBXO36Q8NEA4 188 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 OR7G1Q8NGA0 311 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 PNPT1Q8TCS8 783 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 NKD2Q969F2 451 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TOP1MTQ969P6 601 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 FRMD8Q9BZ67 464 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 KLHL25Q9H0H3 589 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 RPF2Q9H7B2 306 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 LIN28AQ9H9Z2 209 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 MRPL47Q9HD33 250 aaKnown RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 HMG20AQ9NP66 347 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CNGB3Q9NQW8 809 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 C8orf4Q9NR00 106 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms