RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 USP15Q9Y4E8 981 aaPredicted RBP20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 APOC4-APOC2K7ER74 178 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 APOC2P02655 101 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 STMN1P16949 149 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 PSEN1P49768 467 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 ZNF143P52747 638 aaPredicted RBP20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 BSNDQ8WZ55 320 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 CCT8L2Q96SF2 557 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 ARHGAP28Q9P2N2 729 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 POU4F1Q01851 419 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 HECTD3Q5T447 861 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 BRI3BPQ8WY22 251 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 SGF29Q96ES7 293 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 GLP2RO95838 553 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 CHI3L2Q15782 390 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 BAP1Q92560 729 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 CEP41Q9BYV8 373 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 SYNDIG1Q9H7V2 258 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 CLCA2Q9UQC9 943 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 PHF20L1A8MW92 1017 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 CSH1P0DML2 217 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 CSH2P0DML3 217 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 PRMT2P55345 433 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 PRUNE1Q86TP1 453 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 LPCAT1Q8NF37 534 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 WWOXQ9NZC7 414 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 CDYLQ9Y232 598 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 PCDHGC5Q9Y5F6 944 aa20.14■□□□□ 0.82
SEMA6C-201ENST00000341697 KDELR1P24390 212 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 FMO1Q01740 532 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 C9orf57Q5W0N0 161 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 KCNT2Q6UVM3 1135 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 DLK2Q6UY11 383 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 LNX1Q8TBB1 728 aaPredicted RBP20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 EPS8L3Q8TE67 593 aaKnown RBP20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 C15orf59Q2T9L4 293 aaPredicted RBP20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 SLC26A11Q86WA9 606 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 PHF13Q86YI8 300 aaPredicted RBP20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 LRRC43Q8N309 656 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 VAT1Q99536 393 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 ST6GALNAC4Q9H4F1 302 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 RIC8BQ9NVN3 520 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 DDX20Q9UHI6 824 aaKnown RBP20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 CNTFP26441 200 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 RFC1P35251 1148 aaPredicted RBP20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 SERPINB4P48594 390 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 STRA8Q7Z7C7 330 aa20.14■□□□□ 0.81
SEMA6C-201ENST00000341697 EFCAB14O75071 495 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 PPP3CCP48454 512 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 STARD3Q14849 445 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 ARMC6Q6NXE6 501 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 PAFAH2Q99487 392 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 H0Y3Z8 333 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 DNALI1O14645 258 aaPredicted RBP20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 HNRNPCL1O60812 293 aaKnown RBP20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 CLASP2O75122 1294 aaKnown RBP20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 GLI1P08151 1106 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 PLA2G4AP47712 749 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 PREPLQ4J6C6 727 aaPredicted RBP20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 ZBTB41Q5SVQ8 909 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 IFNL1Q8IU54 200 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 ZNF557Q8N988 423 aaPredicted RBP20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 COG4Q9H9E3 785 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 OR12D3Q9UGF7 316 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 ADGRA2Q96PE1 1338 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 RNF103O00237 685 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 ADH1AP07327 375 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 PTPN7P35236 360 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 KDSRQ06136 332 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 MGAT5Q09328 741 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 TAF11Q15544 211 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 PSMD5Q16401 504 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 LRRC38Q5VT99 294 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 SLC24A5Q71RS6 500 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 ZNF473Q8WTR7 871 aaKnown RBP20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 FAM111AQ96PZ2 611 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 PADI3Q9ULW8 664 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 KCNK1O00180 336 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 MPP3Q13368 585 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 LCA5Q86VQ0 697 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 DNMT3LQ9UJW3 386 aa20.13■□□□□ 0.81
SEMA6C-201ENST00000341697 ANKRD65E5RJM6 399 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 O00370 1275 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 FGF10O15520 208 aaPredicted RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 MEFVO15553 781 aaPredicted RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 C6orf10Q5SRN2 563 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 NUP93Q8N1F7 819 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 SPATA17Q96L03 361 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 MTO1Q9Y2Z2 717 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 SMIM28A0A1B0GU29 152 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 RBAK-RBAKDNI3L0D1 243 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 ENO1P06733 434 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 HSP90AA5PQ58FG0 334 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 CCDC126Q96EE4 140 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 FGFBP2Q9BYJ0 223 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 DNPEPQ9ULA0 475 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 RNF112Q9ULX5 631 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms