RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 GIT1Q9Y2X7 761 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 VTNP04004 478 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 OR56A5P0C7T3 313 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 ERVK-10P10266 1014 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 CARSP49589 748 aaKnown RBP7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 PRIM2P49643 509 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 DDR1Q08345 913 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 DEFB115Q30KQ5 88 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 COBLL1Q53SF7 1204 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 SPANXN3Q5MJ09 141 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 PDPK2PQ6A1A2 396 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 ZCCHC8Q6NZY4 707 aaKnown RBP7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 CARNMT1Q8N4J0 409 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 ZNF655Q8N720 491 aaPredicted RBP7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 LRRC52Q8N7C0 313 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 HIPK4Q8NE63 616 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 EFCAB1Q9HAE3 211 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 VTI1BQ9UEU0 232 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 TRIM17Q9Y577 477 aa7.93□□□□□ -1.14
ATP2B4-201ENST00000341360 A0A087X0T9 212 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 A0A1W2PQ67 120 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 OR6C75A6NL08 312 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ARHGEF9O43307 516 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 FKBP9O95302 570 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 FAM228BP0C875 321 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MZF1P28698 734 aaPredicted RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 PTPN7P35236 360 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 HIRAP54198 1017 aaPredicted RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CNGA3Q16281 694 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 KYNUQ16719 465 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 GLRA4Q5JXX5 417 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 FKBP9P1Q75LS8 142 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 P3H2Q8IVL5 708 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 LRRC43Q8N309 656 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 FAM162AQ96A26 154 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 TMEM159Q96B96 161 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 YIPF2Q9BWQ6 316 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 APOL5Q9BWW9 433 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 SLC39A8Q9C0K1 460 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CCDC90BQ9GZT6 254 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 POPDC2Q9HBU9 364 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 SLC40A1Q9NP59 571 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MRPL17Q9NRX2 175 aaKnown RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 C6orf203Q9P0P8 240 aaPredicted RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CRYL1Q9Y2S2 319 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 NRXN3Q9Y4C0 1643 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 TMEM120BA0PK00 339 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 O00370 1275 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 RAD51BO15315 384 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MAN1A2O60476 641 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 KATNA1O75449 491 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ADH1AP07327 375 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CHN1P15882 459 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 HOXB6P17509 224 aaKnown RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 SERPINA4P29622 427 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 NOS2P35228 1153 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 KRT20P35900 424 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MAPK9P45984 424 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CD151P48509 253 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 OTUD4Q01804 1114 aaKnown RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 GRM3Q14832 879 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 C16orf72Q14CZ0 275 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 PKN2Q16513 984 aaKnown RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CCDC153Q494R4 210 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MAP1SQ66K74 1059 aaPredicted RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 KSR1Q8IVT5 923 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ZNF606Q8WXB4 792 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ECSITQ9BQ95 431 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 NMRAL1Q9HBL8 299 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 TMBIM4Q9HC24 238 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ANLNQ9NQW6 1124 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CTNNAL1Q9UBT7 734 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 TSPAN16Q9UKR8 245 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 UBIAD1Q9Y5Z9 338 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 C2CD2LO14523 706 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CXCL8P10145 99 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MSH3P20585 1137 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 GP5P40197 560 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 SLC6A3Q01959 620 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 PRKAA1Q13131 559 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MSLNQ13421 630 aaPredicted RBP7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 DMC1Q14565 340 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 PKN1Q16512 942 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 LYPLAL1Q5VWZ2 237 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 PHACTR4Q8IZ21 702 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MCOLN2Q8IZK6 566 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 MCOLN3Q8TDD5 553 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 HEXDCQ8WVB3 486 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 DNAJB3Q8WWF6 145 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ATL1Q8WXF7 558 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 VPS33AQ96AX1 596 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ATXN7L3BQ96GX2 97 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 CIPCQ9C0C6 399 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 GPRC5CQ9NQ84 441 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 GDF3Q9NR23 364 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 ZMYM5Q9UJ78 669 aa7.92□□□□□ -1.14
ATP2B4-201ENST00000341360 TMCC3Q9ULS5 477 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms