RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LPXNO60711 386 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ATF6P18850 670 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 L1CAMP32004 1257 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 PSEN1P49768 467 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 AIF1P55008 147 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 DPYSL2Q16555 572 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ANKRD20A8PQ5CZ79 823 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 TTC27Q6P3X3 843 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 TMCO3Q6UWJ1 677 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 MICAL1Q8TDZ2 1067 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 CEP295NLQ96MC4 621 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ZNF512Q96ME7 567 aaPredicted RBP18■□□□□ 0.47
CLDN4-201ENST00000340958 RNF157Q96PX1 679 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ZNF670Q9BS34 389 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 TRIM31Q9BZY9 425 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 TKTL2Q9H0I9 626 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 HSFX1Q9UBD0 423 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 PCYOX1Q9UHG3 505 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 FBXW11Q9UKB1 542 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 RAB21Q9UL25 225 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 COL4A4P53420 1690 aaPredicted RBP18■□□□□ 0.47
CLDN4-201ENST00000340958 ESYT3A0FGR9 886 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 DAPK3O43293 454 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 GAS8O95995 478 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 RARGP13631 454 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ADRA1BP35368 520 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 PGFP49763 221 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ARSEP51690 589 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 BYSLQ13895 437 aaKnown RBP18■□□□□ 0.47
CLDN4-201ENST00000340958 MAP9Q49MG5 647 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 BBS12Q6ZW61 710 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 BNIPLQ7Z465 357 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 JAMLQ86YT9 394 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 GPR65Q8IYL9 337 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ATL2Q8NHH9 583 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 P3H4Q92791 437 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 KCTD15Q96SI1 283 aaPredicted RBP18■□□□□ 0.47
CLDN4-201ENST00000340958 CDX2Q99626 313 aaPredicted RBP18■□□□□ 0.47
CLDN4-201ENST00000340958 EMILIN2Q9BXX0 1053 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ZMYND15Q9H091 742 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 SMOC2Q9H3U7 446 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 IL37Q9NZH6 218 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 ZNF148Q9UQR1 794 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 YIPF1Q9Y548 306 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 PATJQ8NI35 1801 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 CCDC151A5D8V7 595 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 H3BRJ5 948 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 LINC00271P0C7V0 271 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 LMNB2Q03252 620 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 TAZQ16635 292 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 VSIG1Q86XK7 387 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 PYROXD2Q8N2H3 581 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 CASP10Q92851 521 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 SERPINB11Q96P15 392 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 TRIM51Q9BSJ1 452 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 NACA2Q9H009 215 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 PRDM12Q9H4Q4 367 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 WDR6Q9NNW5 1121 aaKnown RBP17.99■□□□□ 0.47
CLDN4-201ENST00000340958 TMPRSS4Q9NRS4 437 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 OLA1Q9NTK5 396 aaKnown RBP17.99■□□□□ 0.47
CLDN4-201ENST00000340958 OSER1Q9NX31 292 aa17.99■□□□□ 0.47
CLDN4-201ENST00000340958 SAE1Q9UBE0 346 aaPredicted RBP17.99■□□□□ 0.47
CLDN4-201ENST00000340958 ZSCAN5CA6NGD5 496 aaPredicted RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 MSI1O43347 362 aaKnown RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 ADH1AP07327 375 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CNPP09543 421 aaKnown RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 SPATA31D3P0C874 917 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CSH1P0DML2 217 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CSH2P0DML3 217 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 H2AFXP16104 143 aaPredicted RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 KLRC2P26717 231 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CXCR3P49682 368 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 EPHB3P54753 998 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 OTUD4Q01804 1114 aaKnown RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 TWF1Q12792 350 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 EFEMP1Q12805 493 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 HLTFQ14527 1009 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 KCTD19Q17RG1 926 aaPredicted RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 C10orf120Q5SQS8 335 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 PLPP4Q5VZY2 271 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 C1orf228Q6PIY5 440 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 SPATA31D4Q6ZUB0 917 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 NTAN1Q96AB6 310 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 FRMD8P1Q9BZ68 369 aaPredicted RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 DPH5Q9H2P9 285 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 RXFP1Q9HBX9 757 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 ARFGAP3Q9NP61 516 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CLIC5Q9NZA1 410 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 MAFFQ9ULX9 164 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 REV3LO60673 3130 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 FAM92AA1XBS5 289 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 EPOPA6NHQ4 379 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 EEF2KO00418 725 aaKnown RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 IRAK2O43187 625 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 LIASO43766 372 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 ZFXP17010 805 aaPredicted RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CCR1P32246 355 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CLCN6P51797 869 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 CCNI2Q6ZMN8 369 aaPredicted RBP17.98■□□□□ 0.47
CLDN4-201ENST00000340958 PDZD8Q8NEN9 1154 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms