RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 BYSLQ13895 437 aaKnown RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 MORF4L2Q15014 288 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 TMCO3Q6UWJ1 677 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 RNF19BQ6ZMZ0 732 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 CHST9Q7L1S5 443 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 CCDC117Q8IWD4 279 aaPredicted RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 GBF1Q92538 1859 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 BTN2A3PQ96KV6 586 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 CFAP57Q96MR6 1250 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 KLHL5Q96PQ7 755 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 KRT12Q99456 494 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 TRIM7Q9C029 511 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 FAM204AQ9H8W3 233 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 MTRF1LQ9UGC7 380 aaKnown RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 FETUBQ9UGM5 382 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 YIPF1Q9Y548 306 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 TET1Q8NFU7 2136 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 LRRD1A4D1F6 860 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 C5orf60A6NFR6 353 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 ERI2A8K979 691 aaKnown RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 M0QYT0 321 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 RAD51CO43502 376 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 GCATO75600 419 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 HEXIM1O94992 359 aaKnown RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 HSPA9P38646 679 aaKnown RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 GATMP50440 423 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 FRG1Q14331 258 aaKnown RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 PDK1Q15118 436 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 ELF2Q15723 593 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 GPRIN1Q7Z2K8 1008 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 HDXQ7Z353 690 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 TMEM130Q8N3G9 435 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 FBXO32Q969P5 355 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 MS4A14Q96JA4 679 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 KCTD15Q96SI1 283 aaPredicted RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 TMEM109Q9BVC6 243 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 FAM53CQ9NYF3 392 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 PAK5Q9P286 719 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 TIMM13Q9Y5L4 95 aaPredicted RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 INSL5Q9Y5Q6 135 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 APOEP02649 317 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 IL4RP24394 825 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CYP2F1P24903 491 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 FDFT1P37268 417 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CACNA2D1P54289 1103 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CDH6P55285 790 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 SLC7A9P82251 487 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 PRKD1Q15139 912 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 DCAF6Q58WW2 860 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TMEM184AQ6ZMB5 413 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TAC4Q86UU9 113 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CCDC50Q8IVM0 306 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ELMOD1Q8N336 334 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 SLC22A17Q8WUG5 538 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 RAPGEF5Q92565 580 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 HDAC11Q96DB2 347 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TBC1D31Q96DN5 1066 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ZNF599Q96NL3 588 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CSPG4P5Q96PW8 444 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TGS1Q96RS0 853 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 TMEM209Q96SK2 561 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 LRRC1Q9BTT6 524 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TXLNGYQ9BZA5 131 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.43□□□□□ -1.22
NUP43-201ENST00000340413 ABI2Q9NYB9 513 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 DNMT3LQ9UJW3 386 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TRHDEQ9UKU6 1024 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 USTQ9Y2C2 406 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CDY1Q9Y6F8 540 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 H3BNC9 293 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 MAP2K7O14733 419 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 HCRTO43612 131 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 STK10O94804 968 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 USP17L7P0C7H9 530 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 NCAM1P13591 858 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 RHOQP17081 205 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TPSB2P20231 275 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 VASPP50552 380 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 RASA2Q15283 850 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TPSAB1Q15661 275 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 SPOUT1Q5T280 376 aaKnown RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 CFAP58Q5T655 872 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TIGD7Q6NT04 549 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 GPIHBP1Q8IV16 184 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 EMC1Q8N766 993 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 MCUQ8NE86 351 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 FCRL2Q96LA5 508 aaPredicted RBP7.43□□□□□ -1.22
NUP43-201ENST00000340413 C19orf43Q9BQ61 176 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 WDCPQ9H6R7 721 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 KIF9Q9HAQ2 790 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TMEM30AQ9NV96 361 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 TRPM5Q9NZQ8 1165 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ATG2AQ2TAZ0 1938 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 I3L4J1 428 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 CHADO15335 359 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 ABHD2P08910 425 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 MLNP12872 115 aa7.43□□□□□ -1.22
NUP43-201ENST00000340413 HMGA1P17096 107 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms