RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MANSC1Q9H8J5 431 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 CYLDQ9NQC7 956 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 NR2E3Q9Y5X4 410 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 CXorf49A8MYA2 514 aaPredicted RBP16.89■□□□□ 0.3
LITAF-201ENST00000339430 F5H423 210 aaPredicted RBP16.89■□□□□ 0.3
LITAF-201ENST00000339430 TM9SF1O15321 606 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 DCTN3O75935 186 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 CBX6O95503 412 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 NEFHP12036 1026 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 CYP2F1P24903 491 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 GBE1Q04446 702 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 STILQ15468 1287 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 ACCSLQ4AC99 568 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 FYB2Q5VWT5 728 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 SLC9A4Q6AI14 798 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 NLRP9Q7RTR0 991 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 TMEM110Q86TL2 294 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 NT5DC4Q86YG4 428 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 TTC39CQ8N584 583 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 UTP4Q969X6 686 aaKnown RBP16.89■□□□□ 0.3
LITAF-201ENST00000339430 SENP6Q9GZR1 1112 aaPredicted RBP16.89■□□□□ 0.3
LITAF-201ENST00000339430 NXF3Q9H4D5 531 aaKnown RBP16.89■□□□□ 0.3
LITAF-201ENST00000339430 PHF24Q9UPV7 400 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 TTLL3Q9Y4R7 772 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 NUMBLQ9Y6R0 609 aa16.89■□□□□ 0.3
LITAF-201ENST00000339430 SKIV2L2P42285 1042 aaKnown RBP16.89■□□□□ 0.29
LITAF-201ENST00000339430 DCAF4L1Q3SXM0 396 aa16.89■□□□□ 0.29
LITAF-201ENST00000339430 TAF1BQ53T94 588 aaPredicted RBP16.89■□□□□ 0.29
LITAF-201ENST00000339430 RPAINQ86UA6 219 aa16.89■□□□□ 0.29
LITAF-201ENST00000339430 CAND1Q86VP6 1230 aaKnown RBP16.89■□□□□ 0.29
LITAF-201ENST00000339430 ALKBH8Q96BT7 664 aaKnown RBP16.89■□□□□ 0.29
LITAF-201ENST00000339430 SNX27Q96L92 541 aa16.89■□□□□ 0.29
LITAF-201ENST00000339430 NRDE2Q9H7Z3 1164 aa16.89■□□□□ 0.29
LITAF-201ENST00000339430 KLK14Q9P0G3 267 aa16.89■□□□□ 0.29
LITAF-201ENST00000339430 ZC3H7BQ9UGR2 993 aaKnown RBP16.89■□□□□ 0.29
LITAF-201ENST00000339430 MYO18AQ92614 2054 aaKnown RBP16.89■□□□□ 0.29
LITAF-201ENST00000339430 UGT1A9O60656 530 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 TSHRP16473 764 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 LMO2P25791 158 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 AXLP30530 894 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 SLC10A2Q12908 348 aaPredicted RBP16.88■□□□□ 0.29
LITAF-201ENST00000339430 SOWAHAQ2M3V2 549 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 TEKT4Q8WW24 435 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 APOPT1Q96IL0 206 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 TRIM6Q9C030 488 aaPredicted RBP16.88■□□□□ 0.29
LITAF-201ENST00000339430 KLC2Q9H0B6 622 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 UGT1A7Q9HAW7 530 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 UGT1A10Q9HAW8 530 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 UGT1A8Q9HAW9 530 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 MFHAS1Q9Y4C4 1052 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 ZNF638Q14966 1978 aaKnown RBP16.88■□□□□ 0.29
LITAF-201ENST00000339430 A0A0G2JND7 137 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 TRIM49D1C9J1S8 452 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 METTL18O95568 372 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 RPLP2P05387 115 aaKnown RBP16.88■□□□□ 0.29
LITAF-201ENST00000339430 ALADP13716 330 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 MGAT3Q09327 533 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 ZNF618Q5T7W0 954 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 APBB1IPQ7Z5R6 666 aaPredicted RBP16.88■□□□□ 0.29
LITAF-201ENST00000339430 MTDHQ86UE4 582 aaKnown RBP16.88■□□□□ 0.29
LITAF-201ENST00000339430 NETO2Q8NC67 525 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 POPDC2Q9HBU9 364 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 ZFP69BQ9UJL9 534 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 RALGAPA2Q2PPJ7 1873 aa16.88■□□□□ 0.29
LITAF-201ENST00000339430 BCLAF3A2AJT9 711 aaKnown RBP16.87■□□□□ 0.29
LITAF-201ENST00000339430 MDM4O15151 490 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 RECQL4O94761 1208 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 T-ENOLP0DO92 83 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 TROVE2P10155 538 aaKnown RBP eCLIP16.87■□□□□ 0.29
LITAF-201ENST00000339430 BGNP21810 368 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 L1CAMP32004 1257 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 NEK3P51956 506 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 BEST2Q8NFU1 509 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 RTP4Q96DX8 246 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 ZNF670Q9BS34 389 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 TSSK1BQ9BXA7 367 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 VPS11Q9H270 941 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 PLAC1Q9HBJ0 212 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 SMYD2Q9NRG4 433 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 KANSL3Q9P2N6 904 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 ST3GAL5Q9UNP4 418 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 MAD1L1Q9Y6D9 718 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 C1QAP02745 245 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 RPSAP08865 295 aaKnown RBP16.87■□□□□ 0.29
LITAF-201ENST00000339430 DESP17661 470 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 BMPR2Q13873 1038 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 C9orf57Q5W0N0 161 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 CDHR3Q6ZTQ4 885 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 SH2D5Q6ZV89 423 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 MPP5Q8N3R9 675 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 CCDC185Q8N715 623 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 SLC43A3Q8NBI5 491 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 NDRG1Q92597 394 aaKnown RBP16.87■□□□□ 0.29
LITAF-201ENST00000339430 TBCBQ99426 244 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 GOLGA2P5Q9HBQ8 144 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 MCM8Q9UJA3 840 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 AP4E1Q9UPM8 1137 aa16.87■□□□□ 0.29
LITAF-201ENST00000339430 CFAP69A5D8W1 941 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 ARVCFO00192 962 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 GRIA1P42261 906 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms