RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CCNG2Q16589 344 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 LILRA6Q6PI73 481 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MAATS1Q7Z4T9 603 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 VSIG1Q86XK7 387 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CCDC105Q8IYK2 499 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZNF512Q96ME7 567 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZNF670Q9BS34 389 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 HOMER3Q9NSC5 361 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 STIM2Q9P246 746 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PCYOX1Q9UHG3 505 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CEP290O15078 2479 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 HEXIM1O94992 359 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GOT1P17174 413 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DR1Q01658 176 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SCAPQ12770 1279 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PLD1Q13393 1074 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CAMK1Q14012 370 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TFDP2Q14188 446 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 C10orf120Q5SQS8 335 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DNAJB7Q7Z6W7 309 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TNS4Q8IZW8 715 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PDZD8Q8NEN9 1154 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PCDH19Q8TAB3 1148 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FAF2Q96CS3 445 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MYRFLQ96LU7 910 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SERPINB11Q96P15 392 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GDF15Q99988 308 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CCSER2Q9H7U1 834 aa15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CWC15Q9P013 229 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZSCAN5CA6NGD5 496 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CREB3O43889 395 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TLR5O60602 858 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 LPXNO60711 386 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ARL4AP40617 200 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PTGIRP43119 386 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FNTAP49354 379 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ERVK-21P61565 698 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 VSNL1P62760 191 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DHX34Q14147 1143 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PQLC3Q8N755 202 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 KREMEN2Q8NCW0 462 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 OVCA2Q8WZ82 227 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SAMD11Q96NU1 681 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CSPG4P5Q96PW8 444 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CERS4Q9HA82 394 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MYO7AQ13402 2215 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZNF840PA6NDX5 716 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZNF487B1APH4 448 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FAM72CH0Y354 149 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GLUD1P00367 558 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CCR1P32246 355 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 OTUD4Q01804 1114 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GPM6BQ13491 265 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 BRMS1LQ5PSV4 323 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FAM72AQ5TYM5 149 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FAM72DQ6L9T8 149 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 NPNTQ6UXI9 565 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CCDC149Q6ZUS6 474 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FAM72BQ86X60 149 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MIB1Q86YT6 1006 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TTC13Q8NBP0 860 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ACTL9Q8TC94 416 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ANKRD7Q92527 254 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PSMG2Q969U7 264 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RUNDC3BQ96NL0 473 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 EPB41L5Q9HCM4 733 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TRPM5Q9NZQ8 1165 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MARCH2Q9P0N8 246 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RASAL2Q9UJF2 1139 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RAB21Q9UL25 225 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DNPEPQ9ULA0 475 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TLR6Q9Y2C9 796 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SNX10Q9Y5X0 201 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ANAPC1Q9H1A4 1944 aa15.29■□□□□ 0.04
CDK5RAP3-201ENST00000338399 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ESYT3A0FGR9 886 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 H3BRJ5 948 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 APOC4-APOC2K7ER74 178 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 EEF2KO00418 725 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 APOL1O14791 398 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 LIASO43766 372 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 APOC2P02655 101 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 LRG1P02750 347 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 C8AP07357 584 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PECAM1P16284 738 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 AMPD1P23109 780 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CLCN4P51793 760 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TBX4P57082 545 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SNX30Q5VWJ9 437 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SLC9A4Q6AI14 798 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 WDR93Q6P2C0 686 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms