RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TCEAL8Q8IYN2 117 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 TTC13Q8NBP0 860 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 ATL2Q8NHH9 583 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 PCDH19Q8TAB3 1148 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 ACTL9Q8TC94 416 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 SPPL3Q8TCT6 385 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 MICAL1Q8TDZ2 1067 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 ZNF512Q96ME7 567 aaPredicted RBP15.25■□□□□ 0.03
CBX3-201ENST00000337620 TTLL2Q9BWV7 592 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 TRIM31Q9BZY9 425 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.25■□□□□ 0.033e-9■□□□□ 9.1
CBX3-201ENST00000337620 CLIC5Q9NZA1 410 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 CWC15Q9P013 229 aaKnown RBP15.25■□□□□ 0.03
CBX3-201ENST00000337620 RASAL2Q9UJF2 1139 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 DNPEPQ9ULA0 475 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 LZTS1Q9Y250 596 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 FAM187AA6NFU0 413 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 I6L893 689 aaPredicted RBP15.24■□□□□ 0.03
CBX3-201ENST00000337620 APOL1O14791 398 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 TGM5O43548 720 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 LIASO43766 372 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 ECEL1O95672 775 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 ADH1AP07327 375 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 CA3P07451 260 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 DNAJB1P25685 340 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 KLRC2P26717 231 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 CLCN6P51797 869 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 BYSLQ13895 437 aaKnown RBP15.24■□□□□ 0.03
CBX3-201ENST00000337620 TRADDQ15628 312 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 C10orf120Q5SQS8 335 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 C1orf228Q6PIY5 440 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 NPNTQ6UXI9 565 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 CCNI2Q6ZMN8 369 aaPredicted RBP15.24■□□□□ 0.03
CBX3-201ENST00000337620 VSIG1Q86XK7 387 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 PQLC3Q8N755 202 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 RUBCNQ92622 972 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 SERPINB11Q96P15 392 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 KLHL5Q96PQ7 755 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 CSPG4P5Q96PW8 444 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 EMILIN2Q9BXX0 1053 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 FEZ2Q9UHY8 353 aaPredicted RBP15.24■□□□□ 0.03
CBX3-201ENST00000337620 ZNF148Q9UQR1 794 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 INSL5Q9Y5Q6 135 aa15.24■□□□□ 0.03
CBX3-201ENST00000337620 COL4A4P53420 1690 aaPredicted RBP15.24■□□□□ 0.03
CBX3-201ENST00000337620 RANBP2P49792 3224 aaKnown RBP15.24■□□□□ 0.03
CBX3-201ENST00000337620 HIDE1A8MVS5 230 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 APOC4-APOC2K7ER74 178 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 APOC2P02655 101 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 PECAM1P16284 738 aaPredicted RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 CCR1P32246 355 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 EPHB3P54753 998 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 SCAPQ12770 1279 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 EIF4EBP2Q13542 120 aaPredicted RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 PPP1R7Q15435 360 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 GSTA5Q7RTV2 222 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 GSPT2Q8IYD1 628 aaKnown RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 GRK7Q8WTQ7 553 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 CASKIN2Q8WXE0 1202 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 P3H4Q92791 437 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 FAF2Q96CS3 445 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 UBE2OQ9C0C9 1292 aaKnown RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 RAB17Q9H0T7 212 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 DPH5Q9H2P9 285 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 GDF3Q9NR23 364 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 TLR9Q9NR96 1032 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 CCDC151A5D8V7 595 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 ZNF487B1APH4 448 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 FAM72CH0Y354 149 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 ERLIN1O75477 346 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 HMGA1P17096 107 aaKnown RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 AMPD1P23109 780 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 CARSP49589 748 aaKnown RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 FAM72AQ5TYM5 149 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 FAM72DQ6L9T8 149 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 MSANTD2Q6P1R3 559 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 FAM72BQ86X60 149 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 DDX42Q86XP3 938 aaKnown RBP eCLIP15.23■□□□□ 0.03
CBX3-201ENST00000337620 MIB1Q86YT6 1006 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 PLD5Q8N7P1 536 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 MRPL43Q8N983 215 aaKnown RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 ERP44Q9BS26 406 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 CCSER2Q9H7U1 834 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 OLA1Q9NTK5 396 aaKnown RBP15.23■□□□□ 0.03
CBX3-201ENST00000337620 CHD7Q9P2D1 2997 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 MAFFQ9ULX9 164 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 HEY1Q9Y5J3 304 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 SNX10Q9Y5X0 201 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 CEP290O15078 2479 aa15.23■□□□□ 0.03
CBX3-201ENST00000337620 H3BRJ5 948 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 EEF2KO00418 725 aaKnown RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 DAPK3O43293 454 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 TLR5O60602 858 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 ZDHHC11BP0C7U3 371 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 MYBL2P10244 700 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 PLD1Q13393 1074 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 BRMS1LQ5PSV4 323 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 SLC9A4Q6AI14 798 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 DNAJB7Q7Z6W7 309 aaPredicted RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 PDZD8Q8NEN9 1154 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms