RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C17orf50Q8WW18 174 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 PRR11Q96HE9 360 aaPredicted RBP13.62□□□□□ -0.23
COL2A1-201ENST00000337299 TARS2Q9BW92 718 aaKnown RBP13.62□□□□□ -0.23
COL2A1-201ENST00000337299 ARMC7Q9H6L4 198 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 RAVER2Q9HCJ3 691 aaKnown RBP13.62□□□□□ -0.23
COL2A1-201ENST00000337299 DCDC2Q9UHG0 476 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 ABCC6O95255 1503 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 HEATR9A2RTY3 570 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 J3QRK9 145 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 ASNA1O43681 348 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 POLBP06746 335 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 NME3Q13232 169 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 KRT72Q14CN4 511 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 BORCS5Q969J3 196 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 FBXL8Q96CD0 374 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 PCDH12Q9NPG4 1184 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 ITGB1BP2Q9UKP3 347 aa13.62□□□□□ -0.23
COL2A1-201ENST00000337299 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 MATN2O00339 956 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 DGCR6Q14129 220 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 CAPRIN1Q14444 709 aaKnown RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 MTX3Q5HYI7 312 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 LRP10Q7Z4F1 713 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 WDR55Q9H6Y2 383 aaPredicted RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 EXOSC4Q9NPD3 245 aaKnown RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 TBX20Q9UMR3 447 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 CAMTA1Q9Y6Y1 1673 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 MYH13Q9UKX3 1938 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 GOLGA8TH3BQL2 631 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 SNX2O60749 519 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 CYP1A2P05177 515 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 PSAPP07602 524 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 TBC1D25Q3MII6 688 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 RWDD4Q6NW29 188 aaKnown RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 NPNTQ6UXI9 565 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 NCCRP1Q6ZVX7 275 aaPredicted RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 ADAM32Q8TC27 787 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 USP33Q8TEY7 942 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 FAM172AQ8WUF8 416 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 MBOAT7Q96N66 472 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 AS3MTQ9HBK9 375 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 POMPQ9Y244 141 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 ENTPD1P49961 510 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 ALLCQ8N6M5 410 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 ABCB10Q9NRK6 738 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 C6orf203Q9P0P8 240 aaPredicted RBP13.61□□□□□ -0.23
COL2A1-201ENST00000337299 NR5A2O00482 541 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 CHRNB2P17787 502 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 GRIA3P42263 894 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 DPYSL3Q14195 570 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 DUOXA2Q1HG44 320 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 PACS1Q6VY07 963 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 STRA8Q7Z7C7 330 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 TNIP2Q8NFZ5 429 aa13.61□□□□□ -0.23
COL2A1-201ENST00000337299 RGS5O15539 181 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 CNOT3O75175 753 aaKnown RBP13.6□□□□□ -0.23
COL2A1-201ENST00000337299 CHEK2O96017 543 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 GRIK5Q16478 980 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 XKR5Q6UX68 686 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 ATG14Q6ZNE5 492 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 KATNAL2Q8IYT4 538 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 BBS2Q9BXC9 721 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 OSBPL6Q9BZF3 934 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 TRPC7Q9HCX4 862 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 NRBP2Q9NSY0 501 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 DGKBQ9Y6T7 804 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 SLITRK3O94933 977 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 PSMB9P28065 219 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
COL2A1-201ENST00000337299 LSAMPQ13449 338 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 ZNF568Q3ZCX4 644 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 FAM47CQ5HY64 1035 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 ANKRD22Q5VYY1 191 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL2A1-201ENST00000337299 ABRAQ8N0Z2 381 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 DHRSXQ8N5I4 330 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 LRRC4Q9HBW1 653 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 CIDEBQ9UHD4 219 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 PRR12Q9ULL5 1215 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 GPR75-ASB3A0A0A6YYF3 556 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 WDR27A2RRH5 827 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 FASP25445 335 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 OR52E8Q6IFG1 317 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 GALNT18Q6P9A2 607 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 DHFR2Q86XF0 187 aa13.6□□□□□ -0.23
COL2A1-201ENST00000337299 CRTAMO95727 393 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 ARHGDIAP52565 204 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 DEFA1P59665 94 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 DEFA3P59666 94 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 FAM71AQ8IYT1 594 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 ZNF606Q8WXB4 792 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 SLITRK1Q96PX8 696 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 VPS33BQ9H267 617 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 CHST12Q9NRB3 414 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms