RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 FGF19O95750 216 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 F9P00740 461 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 SRGAP2BP0DMP2 458 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 GBP1P32455 592 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 LTBRP36941 435 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 AMPD2Q01433 879 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 TEAD2Q15562 447 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 KCNT1Q5JUK3 1230 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 POTEHQ6S545 545 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 POLNQ7Z5Q5 900 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 FCRL2Q96LA5 508 aaPredicted RBP22.37■■□□□ 1.17
TPM1-204ENST00000334895 GCNAQ96QF7 691 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 PSMB7Q99436 277 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 NCAPGQ9BPX3 1015 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 KLHL11Q9NVR0 708 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 XIRP2A4UGR9 3374 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 RARAP10276 462 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 NNTQ13423 1086 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 SKIV2LQ15477 1246 aaKnown RBP22.36■■□□□ 1.17
TPM1-204ENST00000334895 TRIP4Q15650 581 aaPredicted RBP22.36■■□□□ 1.17
TPM1-204ENST00000334895 HADHQ16836 314 aaKnown RBP22.36■■□□□ 1.17
TPM1-204ENST00000334895 ZC3H12AQ5D1E8 599 aaKnown RBP22.36■■□□□ 1.17
TPM1-204ENST00000334895 TADA2BQ86TJ2 420 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 ARL14EPQ8N8R7 260 aaPredicted RBP22.36■■□□□ 1.17
TPM1-204ENST00000334895 MAB21L3Q8N8X9 362 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 ZFRQ96KR1 1074 aaKnown RBP22.36■■□□□ 1.17
TPM1-204ENST00000334895 SNRNP25Q9BV90 132 aaKnown RBP22.36■■□□□ 1.17
TPM1-204ENST00000334895 SLC46A2Q9BY10 475 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 MAGEB5Q9BZ81 275 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 GPATCH2LQ9NWQ4 482 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 CLDND1Q9NY35 253 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 SNX12Q9UMY4 172 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 TLR6Q9Y2C9 796 aa22.36■■□□□ 1.17
TPM1-204ENST00000334895 SLC12A8A0AV02 714 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 IGLV3-27P01718 113 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 HOXB8P17481 243 aaPredicted RBP22.35■■□□□ 1.17
TPM1-204ENST00000334895 CA9Q16790 459 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 ITFG1Q8TB96 612 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 UBE2Q2Q8WVN8 375 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 NACA2Q9H009 215 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 S1PR5Q9H228 398 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 CEBPBP17676 345 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 CXCR5P32302 372 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 TBX4P57082 545 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 ZXDBP98169 803 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 KATNAL2Q8IYT4 538 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 UBL4BQ8N7F7 174 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 TEKT4Q8WW24 435 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 NTAN1Q96AB6 310 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 KLF16Q9BXK1 252 aaPredicted RBP22.35■■□□□ 1.17
TPM1-204ENST00000334895 RRAGDQ9NQL2 400 aaPredicted RBP22.35■■□□□ 1.17
TPM1-204ENST00000334895 ARHGEF38Q9NXL2 777 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 FZD10Q9ULW2 581 aa22.35■■□□□ 1.17
TPM1-204ENST00000334895 SPTBN5Q9NRC6 3674 aaKnown RBP22.34■■□□□ 1.17
TPM1-204ENST00000334895 KCNU1A8MYU2 1149 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 KCNK3O14649 394 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 SRGAP2O75044 1071 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 KRT7P08729 469 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 HDCP19113 662 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 ADRA1BP35368 520 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 KCNQ1P51787 676 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 PPP2R5DQ14738 602 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 BOLA3Q53S33 107 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 ERMARDQ5T6L9 678 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 GPR158Q5T848 1215 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 SND1Q7KZF4 910 aaKnown RBP eCLIP22.34■■□□□ 1.17
TPM1-204ENST00000334895 ANKS1BQ7Z6G8 1248 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 KIF18AQ8NI77 898 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 COG1Q8WTW3 980 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 ING5Q8WYH8 240 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 RAPGEF5Q92565 580 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 HSPH1Q92598 858 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 PABPC5Q96DU9 382 aaKnown RBP22.34■■□□□ 1.17
TPM1-204ENST00000334895 OSBPL9Q96SU4 736 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 TKTL2Q9H0I9 626 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 ADAM7Q9H2U9 754 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 WDCPQ9H6R7 721 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 GKN1Q9NS71 199 aa22.34■■□□□ 1.17
TPM1-204ENST00000334895 MRPS23Q9Y3D9 190 aaKnown RBP22.34■■□□□ 1.17
TPM1-204ENST00000334895 HBS1LQ9Y450 684 aaKnown RBP22.34■■□□□ 1.17
TPM1-204ENST00000334895 HELZP42694 1942 aaKnown RBP22.33■■□□□ 1.17
TPM1-204ENST00000334895 ZNF197O14709 1029 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 HMBSP08397 361 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 MBL2P11226 248 aaPredicted RBP22.33■■□□□ 1.17
TPM1-204ENST00000334895 CCR1P32246 355 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 ARSEP51690 589 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 RWDD2BP57060 319 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 SCAPQ12770 1279 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 BRMS1LQ5PSV4 323 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 AADACL2Q6P093 401 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 ADAMTS19Q8TE59 1207 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 WBP2Q969T9 261 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 MSLNLQ96KJ4 702 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 TASP1Q9H6P5 420 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 PRDM6Q9NQX0 595 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.33■■□□□ 1.17
TPM1-204ENST00000334895 SMPD4Q9NXE4 827 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 XPO7Q9UIA9 1087 aaKnown RBP22.33■■□□□ 1.17
TPM1-204ENST00000334895 AP4E1Q9UPM8 1137 aa22.33■■□□□ 1.17
TPM1-204ENST00000334895 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms