RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 EFHC2Q5JST6 749 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 KCNT2Q6UVM3 1135 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 C4orf50Q6ZRC1 276 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 CENPUQ71F23 418 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 SCLYQ96I15 445 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 SERPINB12Q96P63 405 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 RNF208Q9H0X6 261 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 DDIT4Q9NX09 232 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 HCSTQ9UBK5 93 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.57■□□□□ 0.4
DDX41-201ENST00000330503 ZNF638Q14966 1978 aaKnown RBP17.57■□□□□ 0.4
DDX41-201ENST00000330503 H3BRJ5 948 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 TRAPPC3O43617 180 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 AGTP01019 485 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 GRIK1P39086 918 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 CXCR3P49682 368 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 PGFP49763 221 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 MNX1P50219 401 aaPredicted RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 ATN1P54259 1190 aaPredicted RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 SEMA3BQ13214 749 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 DPYSQ14117 519 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 MRPL58Q14197 206 aaKnown RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 KCNJ11Q14654 390 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 HIF1AQ16665 826 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 CDKL3Q8IVW4 592 aaPredicted RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 CCDC13Q8IYE1 715 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 ARFGAP2Q8N6H7 521 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 OLFM3Q96PB7 478 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 WDR83Q9BRX9 315 aaKnown RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 PRDM16Q9HAZ2 1276 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDX41-201ENST00000330503 PAK5Q9P286 719 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 XPO7Q9UIA9 1087 aaKnown RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 PATJQ8NI35 1801 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 ERICH4A6NGS2 130 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 AIF1P55008 147 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 BASP1P80723 227 aaKnown RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 VARS2Q5ST30 1063 aaKnown RBP17.56■□□□□ 0.4
DDX41-201ENST00000330503 ZBED8Q8IZ13 594 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 ABI1Q8IZP0 508 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 QKIQ96PU8 341 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDX41-201ENST00000330503 COLEC11Q9BWP8 271 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 GPR62Q9BZJ7 368 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 MARCH5Q9NX47 278 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 ADAM28Q9UKQ2 775 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 SCN5AQ14524 2016 aa17.56■□□□□ 0.4
DDX41-201ENST00000330503 TTC3P53804 2025 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 E7ESA3 106 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 SMAPO00193 183 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 SYN3O14994 580 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 CREB3O43889 395 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 F9P00740 461 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 ARL4CP56559 192 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 BEND5Q7L4P6 421 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 TAC4Q86UU9 113 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 ANKMY2Q8IV38 441 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 DCP1BQ8IZD4 617 aaKnown RBP17.55■□□□□ 0.4
DDX41-201ENST00000330503 NETO2Q8NC67 525 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 CCDC110Q8TBZ0 833 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 APBB2Q92870 758 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 TTC25Q96NG3 672 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 PHACTR1Q9C0D0 580 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 VWA8A3KMH1 1905 aa17.55■□□□□ 0.4
DDX41-201ENST00000330503 A6NNZ2 444 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 EEF2KO00418 725 aaKnown RBP17.54■□□□□ 0.4
DDX41-201ENST00000330503 EIF3HO15372 352 aaKnown RBP eCLIP17.54■□□□□ 0.4
DDX41-201ENST00000330503 MFSD11O43934 449 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 GCATO75600 419 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 CXCL10P02778 98 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 ALDH2P05091 517 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 SLC11A1P49279 550 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 SLC5A3P53794 718 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 CCL23P55773 120 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 GPX6P59796 221 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 EIF4EBP2Q13542 120 aaPredicted RBP17.54■□□□□ 0.4
DDX41-201ENST00000330503 STAT4Q14765 748 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 TUBB8Q3ZCM7 444 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 FAM171A1Q5VUB5 890 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 SLC39A5Q6ZMH5 540 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 RFX8Q6ZV50 586 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 ANKRD33Q7Z3H0 272 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 SCD5Q86SK9 330 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 DQX1Q8TE96 717 aaKnown RBP17.54■□□□□ 0.4
DDX41-201ENST00000330503 RAB6BQ9NRW1 208 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 CTNNAL1Q9UBT7 734 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 LRFN2Q9ULH4 789 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 CLUHO75153 1309 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 DCLK1O15075 740 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 CHADO15335 359 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 IGLV3-25P01717 112 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 VAV1P15498 845 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 FAAP100Q0VG06 881 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 PAFAH1B3Q15102 231 aaKnown RBP17.54■□□□□ 0.4
DDX41-201ENST00000330503 SYCP2LQ5T4T6 812 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 SCN4BQ8IWT1 228 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 CYP4X1Q8N118 509 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 B3GALT6Q96L58 329 aa17.54■□□□□ 0.4
DDX41-201ENST00000330503 ABI2Q9NYB9 513 aaPredicted RBP17.54■□□□□ 0.4
DDX41-201ENST00000330503 SNX10Q9Y5X0 201 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms