RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CRABP2P29373 138 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 POLR2LP62875 67 aaKnown RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 GUCY1A3Q02108 690 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 KDELC2Q7Z4H8 507 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 C4orf33Q8N1A6 199 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 MBOAT7Q96N66 472 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ARHGAP26Q9UNA1 814 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 SPACA6W5XKT8 324 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ADRB2P07550 413 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 CCDC153Q494R4 210 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 BLOC1S5Q8TDH9 187 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 WWOXQ9NZC7 414 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF839A8K0R7 811 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ATN1P54259 1190 aaPredicted RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 BEX3Q00994 111 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 HABP4Q5JVS0 413 aaKnown RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 CACHD1Q5VU97 1274 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 STK40Q8N2I9 435 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 OR9Q1Q8NGQ5 310 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ATXN7L3BQ96GX2 97 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 SLC7A5P2Q9GIP4 190 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ACOT9Q9Y305 439 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 MOXD2PA6NHM9 499 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 LZTS3O60299 673 aaPredicted RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ASGR1P07306 291 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 PGM1P36871 562 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 PARP6Q2NL67 630 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 IL31RAQ8NI17 732 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 SNX5Q9Y5X3 404 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 CA12O43570 354 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 SYNCRIPO60506 623 aaKnown RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 CAND2O75155 1236 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ATP5C1P36542 298 aaKnown RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ORC1Q13415 861 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 GAD1Q99259 594 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 CPNE1Q99829 537 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF670Q9BS34 389 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 EIF2AQ9BY44 585 aaKnown RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 JCHAINP01591 159 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 SLC39A12Q504Y0 691 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 PKN3Q6P5Z2 889 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 SLC24A3Q9HC58 644 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 RBM22Q9NW64 420 aaKnown RBP eCLIP11.73□□□□□ -0.534e-7■■■■■ 38
COL4A5-201ENST00000328300 CHADO15335 359 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ZW10O43264 779 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 DARSP14868 501 aaKnown RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 TAL1P17542 331 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 LAG3P18627 525 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 PIK3CGP48736 1102 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 TGM3Q08188 693 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 BRMS1LQ5PSV4 323 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 KIF17Q9P2E2 1029 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 FAM153AQ9UHL3 310 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 BTBD19C9JJ37 291 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF862O60290 1169 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 LSP1P33241 339 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 TUBP50607 506 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 CDK7P50613 346 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 MAP3K10Q02779 954 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 MPP3Q13368 585 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 IL17AQ16552 155 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 KCNT1Q5JUK3 1230 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 TEKT4Q8WW24 435 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 DPF3Q92784 378 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ZBTB45Q96K62 511 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 PAFAH2Q99487 392 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 C1QTNF7Q9BXJ2 289 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ATP13A1Q9HD20 1204 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 MLXIPLQ9NP71 852 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 CNGB3Q9NQW8 809 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 A0A0B4J269 797 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 XPO1O14980 1071 aaKnown RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 MYL4P12829 197 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 GP5P40197 560 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 KCNA1Q09470 495 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 SPDYE7PQ495Y7 208 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 LRRC8EQ6NSJ5 796 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 EMC1Q8N766 993 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 TRIML2Q8N7C3 387 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 YIPF3Q9GZM5 350 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 EPC1Q9H2F5 836 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 RCOR3Q9P2K3 495 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-201ENST00000328300 RAB21Q9UL25 225 aa11.73□□□□□ -0.53
COL4A5-201ENST00000328300 ADH1AP07327 375 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 SCNN1GP51170 649 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 TUSC3Q13454 348 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 NDEL1Q9GZM8 345 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 CDC42EP4Q9H3Q1 356 aaKnown RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 GPATCH2LQ9NWQ4 482 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms