RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 HSPH1Q92598 858 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 ARHGEF1Q92888 912 aaKnown RBP13.18□□□□□ -0.3
CCDC60-201ENST00000327554 RANBP9Q96S59 729 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 PKP2Q99959 881 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 HAUS8Q9BT25 410 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 PRSS51A0A1B0GVH4 220 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 SERPINB7O75635 380 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 ALDH2P05091 517 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 SERPINE1P05121 402 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 XRCC1P18887 633 aaPredicted RBP13.18□□□□□ -0.3
CCDC60-201ENST00000327554 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
CCDC60-201ENST00000327554 ROR1Q01973 937 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 PCLAFQ15004 111 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 ZFP1Q6P2D0 407 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 HHIPL2Q6UWX4 724 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 C4orf19Q8IY42 314 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 WDTC1Q8N5D0 677 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 CCT7Q99832 543 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 NTPCRQ9BSD7 190 aaKnown RBP13.18□□□□□ -0.3
CCDC60-201ENST00000327554 KLC2Q9H0B6 622 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 FAM96AQ9H5X1 160 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 RAB6BQ9NRW1 208 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 PRPF19Q9UMS4 504 aaKnown RBP13.18□□□□□ -0.3
CCDC60-201ENST00000327554 NR2E3Q9Y5X4 410 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 CBFA2T3O75081 653 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 LSM8O95777 96 aaKnown RBP13.17□□□□□ -0.3
CCDC60-201ENST00000327554 COL6A2P12110 1019 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 ZFXP17010 805 aaPredicted RBP13.17□□□□□ -0.3
CCDC60-201ENST00000327554 OSBPP22059 807 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 THOP1P52888 689 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 NAA20P61599 178 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 CYTH1Q15438 398 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 TAF5Q15542 800 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 ANKDD1AQ495B1 522 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 N4BP2L1Q5TBK1 243 aaPredicted RBP13.17□□□□□ -0.3
CCDC60-201ENST00000327554 SCARA3Q6AZY7 606 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 DARS2Q6PI48 645 aaKnown RBP13.17□□□□□ -0.3
CCDC60-201ENST00000327554 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 PPP4R1Q8TF05 950 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 GIPC3Q8TF64 312 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
CCDC60-201ENST00000327554 ZNF541Q9H0D2 1346 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 TRIM43BA6NCK2 446 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 EXTL3O43909 919 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 PLIN3O60664 434 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 PRKCGP05129 697 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 PSMC3P17980 439 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
CCDC60-201ENST00000327554 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 CCR3P51677 355 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 RELAQ04206 551 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 FLOT2Q14254 428 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 C16orf72Q14CZ0 275 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 NOMO1Q15155 1222 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 ZNF423Q2M1K9 1284 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
CCDC60-201ENST00000327554 GRIN3AQ8TCU5 1115 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 FAM198AQ9UFP1 575 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 LRRC37AA6NMS7 1700 aa13.17□□□□□ -0.3
CCDC60-201ENST00000327554 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 TBC1D12O60347 775 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 ZBED1O96006 694 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 GH2P01242 217 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 ZNF26P17031 533 aaPredicted RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 ACADVLP49748 655 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 SERPINB9P50453 376 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 TXNL4AP83876 142 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 CRY2Q49AN0 593 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 PDCD4Q53EL6 469 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 PIGGQ5H8A4 983 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 FAXCQ5TGI0 409 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 TRIML2Q8N7C3 387 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 TMEM35BQ8NCS4 154 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 LENG8Q96PV6 779 aaPredicted RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 PCDHAC2Q9Y5I4 1007 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 C7orf72A4D263 438 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 ADCY6O43306 1168 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 EPHA3P29320 983 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 MSX2P35548 267 aaPredicted RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 MS4A2Q01362 244 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 CNTN2Q02246 1040 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 TGFBIQ15582 683 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 C10orf107Q8IVU9 208 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms