RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TPH1P17752 444 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 GRK2P25098 689 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PCYT1AP49585 367 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 NOMO3P69849 1222 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 NRF1Q16656 503 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 CYP2R1Q6VVX0 501 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 METTL23Q86XA0 190 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 CCNJLQ8IV13 435 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 SCUBE3Q8IX30 993 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PIWIL2Q8TC59 973 aaKnown RBP16.88■□□□□ 0.29
SFXN1-201ENST00000321442 SNED1Q8TER0 1413 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 GIPC2Q8TF65 315 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PLEKHA5Q9HAU0 1116 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 STXBP5LQ9Y2K9 1186 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 MYH13Q9UKX3 1938 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 FAM200BP0CF97 657 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 THPOP40225 353 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PPIDQ08752 370 aaKnown RBP16.88■□□□□ 0.29
SFXN1-201ENST00000321442 INPP5AQ14642 412 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 XRRA1Q6P2D8 792 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 TTC39CQ8N584 583 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 KYQ8NBH2 561 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 C7orf43Q8WVR3 580 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 KCNK4Q9NYG8 393 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 TCRBV9S1A1TA0A576 114 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 APOC4-APOC2K7ER74 178 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 SUPT7LO94864 414 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 APOC2P02655 101 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 HMGCRP04035 888 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 DENND1BQ6P3S1 775 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 TTC7BQ86TV6 843 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 COLGALT1Q8NBJ5 622 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 JADE3Q92613 823 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 EPAS1Q99814 870 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 IARS2Q9NSE4 1012 aaKnown RBP16.87■□□□□ 0.29
SFXN1-201ENST00000321442 ARHGEF38Q9NXL2 777 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 PLA2G4CQ9UP65 541 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 RUVBL2Q9Y230 463 aaKnown RBP16.87■□□□□ 0.29
SFXN1-201ENST00000321442 MYH6P13533 1939 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 ABHD2P08910 425 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 KCTD21Q4G0X4 260 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 TDRD10Q5VZ19 366 aaKnown RBP16.87■□□□□ 0.29
SFXN1-201ENST00000321442 ZBTB49Q6ZSB9 765 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 NETO2Q8NC67 525 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.291e-8■■■□□ 14.9
SFXN1-201ENST00000321442 ARHGEF3Q9NR81 526 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 AP4E1Q9UPM8 1137 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 LRRC37A3O60309 1634 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 ZMYM2Q9UBW7 1377 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 M0QYT0 321 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 FAM155BO75949 473 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 SERPINE1P05121 402 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 MGAT1P26572 445 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-201ENST00000321442 UGP2Q16851 508 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 RFWD3Q6PCD5 774 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 TDRD5Q8NAT2 981 aaKnown RBP16.87■□□□□ 0.29
SFXN1-201ENST00000321442 TMEM109Q9BVC6 243 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 SEMA6AQ9H2E6 1030 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 IL1RAPL1Q9NZN1 696 aa16.87■□□□□ 0.29
SFXN1-201ENST00000321442 RGS17Q9UGC6 210 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-201ENST00000321442 SNX2O60749 519 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 CYP2F1P24903 491 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 CAPRIN1Q14444 709 aaKnown RBP16.86■□□□□ 0.29
SFXN1-201ENST00000321442 WLSQ5T9L3 541 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 SETD3Q86TU7 594 aaPredicted RBP16.86■□□□□ 0.29
SFXN1-201ENST00000321442 ZBTB46Q86UZ6 589 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 ULK2Q8IYT8 1036 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 PCYOX1LQ8NBM8 494 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 ASAP3Q8TDY4 903 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 TNIP3Q96KP6 325 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 ZNF229Q9UJW7 825 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 MROH7Q68CQ1 1323 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 LYPLA1O75608 230 aaPredicted RBP16.86■□□□□ 0.29
SFXN1-201ENST00000321442 TPBGLP0DKB5 382 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 KCNA2P16389 499 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 AMPD1P23109 780 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 HSD17B4P51659 736 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 PABPC5Q96DU9 382 aaKnown RBP16.86■□□□□ 0.29
SFXN1-201ENST00000321442 RNPEPQ9H4A4 650 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 SRP72O76094 671 aaKnown RBP16.86■□□□□ 0.29
SFXN1-201ENST00000321442 C16orf72Q14CZ0 275 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 ACAP1Q15027 740 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 LPCAT4Q643R3 524 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 RBM15BQ8NDT2 890 aaKnown RBP16.86■□□□□ 0.29
SFXN1-201ENST00000321442 OR6Y1Q8NGX8 325 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 TMEM176AQ96HP8 235 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 TMEM79Q9BSE2 394 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 SPON2Q9BUD6 331 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 FRMD8P1Q9BZ68 369 aaPredicted RBP16.86■□□□□ 0.29
SFXN1-201ENST00000321442 ADGRA3Q8IWK6 1321 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 KNL1Q8NG31 2342 aa16.86■□□□□ 0.29
SFXN1-201ENST00000321442 SAC3D1A6NKF1 404 aa16.85■□□□□ 0.29
SFXN1-201ENST00000321442 CYB561D2O14569 222 aa16.85■□□□□ 0.29
SFXN1-201ENST00000321442 KDM1AO60341 852 aa16.85■□□□□ 0.29
SFXN1-201ENST00000321442 MAPK10P53779 464 aa16.85■□□□□ 0.29
SFXN1-201ENST00000321442 STX5Q13190 355 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms