RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 TAF11Q15544 211 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 STRA8Q7Z7C7 330 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 KIRREL3Q8IZU9 778 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 GBP7Q8N8V2 638 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-201ENST00000321105 ART4Q93070 314 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 THTPAQ9BU02 230 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 LRRC4CQ9HCJ2 640 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 SLC40A1Q9NP59 571 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 MPP6Q9NZW5 540 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 SHOC2Q9UQ13 582 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 ATP11BQ9Y2G3 1177 aa11.35□□□□□ -0.59
TOP3A-201ENST00000321105 SKAP2O75563 359 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 CBX6O95503 412 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 TUBP50607 506 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 GRAMD1BQ3KR37 738 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 LAYNQ6UX15 382 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 PTAR1Q7Z6K3 402 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SPATA6LQ8N4H0 392 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 ANKRD52Q8NB46 1076 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 NRDE2Q9H7Z3 1164 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 CYP1A1P04798 512 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 MYL2P10916 166 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 GRM5P41594 1212 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 LHX1P48742 406 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 RAB6CQ53S08 254 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 LMNTD2Q8IXW0 634 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 ZCCHC9Q8N567 271 aaKnown RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 ALLCQ8N6M5 410 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 MAGEB5Q9BZ81 275 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 RAB6CQ9H0N0 254 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 RNF208Q9H0X6 261 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SDCBP2Q9H190 292 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 PADI3Q9ULW8 664 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 USH1CQ9Y6N9 552 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 MYO18AQ92614 2054 aaKnown RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 B2RBV5 119 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SPECC1L-ADORA2AF8WAN1 911 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 PAPSS1O43252 624 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SOAT2O75908 522 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 VAPBO95292 243 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 IQCF3P0C7M6 154 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 ERCC2P18074 760 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 PAMP19021 973 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SCTRP47872 440 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 BBS12Q6ZW61 710 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 NLRP9Q7RTR0 991 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 POLNQ7Z5Q5 900 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SH3TC2Q8TF17 1288 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 EXOC2Q96KP1 924 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 MECRQ9BV79 373 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 FICDQ9BVA6 458 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SENP6Q9GZR1 1112 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-201ENST00000321105 GRHL1Q9NZI5 618 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 HACD3Q9P035 362 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SIX4Q9UIU6 781 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 STXBP5LQ9Y2K9 1186 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 TRPV2Q9Y5S1 764 aa11.34□□□□□ -0.59
TOP3A-201ENST00000321105 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 GFAPP14136 432 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 SLC8A1P32418 973 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 CDKN2BP42772 138 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 TPD52P55327 224 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 LILRA4P59901 499 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 PLIN5Q00G26 463 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 CRHR2Q13324 411 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 TTC39BQ5VTQ0 682 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 DCP1BQ8IZD4 617 aaKnown RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 TTC8Q8TAM2 541 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 UTP6Q9NYH9 597 aaKnown RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 MEIS3P2A8K0S8 358 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 CBX4O00257 560 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 AIM2O14862 343 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 PHGDHO43175 533 aaKnown RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 OPHN1O60890 802 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 MRPS6P82932 125 aaKnown RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 KLC3Q6P597 504 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 LONP2Q86WA8 852 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 EMID1Q96A84 441 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 TMEM169Q96HH4 297 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 APBA2Q99767 749 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 POPDC2Q9HBU9 364 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 NDFIP2Q9NV92 336 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 TRIM33Q9UPN9 1127 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 NCF1BA6NI72 391 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 NCF1CA8MVU1 366 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 ALDH2P05091 517 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 NCF1P14598 390 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-201ENST00000321105 SCNN1BP51168 640 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 CUL3Q13618 768 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 VEPH1Q14D04 833 aa11.33□□□□□ -0.6
TOP3A-201ENST00000321105 RBBP5Q15291 538 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms