RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ITGA7Q13683 1181 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 LPIN1Q14693 890 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 EFHC2Q5JST6 749 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 OTUD1Q5VV17 481 aaPredicted RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 HEATR6Q6AI08 1181 aaKnown RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 CCSAPQ6IQ19 270 aaPredicted RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 PPP1R21Q6ZMI0 780 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 MRPL10Q7Z7H8 261 aaKnown RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 CDKL3Q8IVW4 592 aaPredicted RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 KLHDC9Q8NEP7 349 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 ZMIZ2Q8NF64 920 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 SLC7A14Q8TBB6 771 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 NT5C3BQ969T7 300 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 PAFAH2Q99487 392 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 LGMNQ99538 433 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 ACSS3Q9H6R3 686 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 PIGVQ9NUD9 493 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 FGFR1OP2Q9NVK5 253 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 SAMD15Q9P1V8 674 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 SLC24A2Q9UI40 661 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 CDH9Q9ULB4 789 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 RALGAPA2Q2PPJ7 1873 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 TCRBV9S1A1TA0A576 114 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 F5H423 210 aaPredicted RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 ALDH1A1P00352 501 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 FYNP06241 537 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 KRT4P19013 534 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 PCSK1P29120 753 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 MSH2P43246 934 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 DAOAP59103 153 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 KLHL38Q2WGJ6 581 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 VPS52Q8N1B4 723 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 ANKS4BQ8N8V4 417 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 CCDC197Q8NCU1 140 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 RNF139Q8WU17 664 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 CKAP2Q8WWK9 683 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 ARHGEF4Q9NR80 690 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 IGSF5Q9NSI5 407 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 GGA2Q9UJY4 613 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 TEX264Q9Y6I9 313 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 RPLP2P05387 115 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 CA4P22748 312 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 BDNFP23560 247 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 NKX3-2P78367 333 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 SP3Q02447 781 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 XRCC4Q13426 336 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 ZKSCAN8Q15776 578 aaPredicted RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 CCDC121Q6ZUS5 278 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 YTHDF3Q7Z739 585 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 PIGWQ7Z7B1 504 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 AGGF1Q8N302 714 aaeCLIP7.83□□□□□ -1.16
IFT88-201ENST00000319980 PCSK9Q8NBP7 692 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 CCNYQ8ND76 341 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 TFB1MQ8WVM0 346 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 HTR3CQ8WXA8 447 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 EDEM1Q92611 657 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 CFAP36Q96G28 342 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 SGSM3Q96HU1 749 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 SLC2A13Q96QE2 648 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 TGS1Q96RS0 853 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 CYTH2Q99418 400 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 PPCSQ9HAB8 311 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 USP3Q9Y6I4 520 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 SCN10AQ9Y5Y9 1956 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 GOLGA6L7A0A1B0GV03 622 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 F8W810 466 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 GOLGA8RI6L899 631 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 AOC2O75106 756 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 GCATO75600 419 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 FBXO21O94952 628 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 ITGB1P05556 798 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 ODC1P11926 461 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 RPA3P35244 121 aaPredicted RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 MLLT3P42568 568 aaPredicted RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 MAGEA9P43362 315 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 RAB27AP51159 221 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 WDR4P57081 412 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 KBTBD12Q3ZCT8 623 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 ADGRD1Q6QNK2 874 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 CAND1Q86VP6 1230 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 TNS4Q8IZW8 715 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 MICALL1Q8N3F8 863 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 MYLPFQ96A32 169 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 SMARCD1Q96GM5 515 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 RTP3Q9BQQ7 232 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 NSRP1Q9H0G5 558 aaKnown RBP7.83□□□□□ -1.16
IFT88-201ENST00000319980 CNGB3Q9NQW8 809 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 DDIT4Q9NX09 232 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 SENP1Q9P0U3 644 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 IKBKGQ9Y6K9 419 aa7.83□□□□□ -1.16
IFT88-201ENST00000319980 FAM72CH0Y354 149 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 H3BRJ5 948 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 MFSD11O43934 449 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ADRA1BP35368 520 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 GRIA1P42261 906 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 NUBP1P53384 320 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 IL9RQ01113 521 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 AP1B1Q10567 949 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 RASA2Q15283 850 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 FAM72AQ5TYM5 149 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms