RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 MID2Q9UJV3 735 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 NME7Q9Y5B8 376 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 DCHS1Q96JQ0 3298 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 FN1P02751 2386 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 HSMCR30P0CW71 290 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 TRIM67Q6ZTA4 783 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 CROCCP3Q8IVE0 287 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 MYCBPAPQ8TBZ2 947 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 HDAC2Q92769 488 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 POP5Q969H6 163 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 LENG9Q96B70 501 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 CEP44Q9C0F1 390 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 TMBIM4Q9HC24 238 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 TRPV5Q9NQA5 729 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 CIDEBQ9UHD4 219 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 DAPK2Q9UIK4 370 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 H7C0S8 307 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SOCS7O14512 581 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SLITRK3O94933 977 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 CIITAP33076 1130 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 EPHA7Q15375 998 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SPOUT1Q5T280 376 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 MTHFD1LQ6UB35 978 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 RNF207Q6ZRF8 634 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 BRSK2Q8IWQ3 736 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 PYROXD2Q8N2H3 581 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 MTBPQ96DY7 904 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SERPINI1Q99574 410 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 GOLGA2P5Q9HBQ8 144 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SFMBT1Q9UHJ3 866 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 ITIH6Q6UXX5 1313 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 MAPK13O15264 365 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 IDH3BO43837 385 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 FESP07332 822 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 DNAJA1P31689 397 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 VHLP40337 213 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SCTRP47872 440 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 RGS7P49802 495 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 GMPSP49915 693 aaPredicted RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 GALK1P51570 392 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 IL9RQ01113 521 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 CDR2Q01850 454 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 ODR4Q5SWX8 454 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 PAPD7Q5XG87 772 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 EXOC3L1Q86VI1 746 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SCAIQ8N9R8 606 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 TNIP3Q96KP6 325 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 FBXO6Q9NRD1 293 aaPredicted RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 CNOT3O75175 753 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 ATP6V1B1P15313 513 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 PSMC3P17980 439 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 CDH3P22223 829 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 HMOX2P30519 316 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 PTGIRP43119 386 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 ALDH5A1P51649 535 aaPredicted RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 ELF3P78545 371 aaPredicted RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 MED21Q13503 144 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 FAM214AQ32MH5 1076 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 C16orf86Q6ZW13 317 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 CYP4V2Q6ZWL3 525 aaPredicted RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 FBXO11Q86XK2 927 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 POU5F2Q8N7G0 328 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 APPL2Q8NEU8 664 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 GPR152Q8TDT2 470 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 LARP4BQ92615 738 aaKnown RBP3.72□□□□□ -1.81
GEN1-201ENST00000317402 AK8Q96MA6 479 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 DEPDC7Q96QD5 511 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 PANX2Q96RD6 677 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 ZNF577Q9BSK1 485 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 KBTBD4Q9NVX7 518 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 GRHL1Q9NZI5 618 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 MBD2Q9UBB5 411 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 PLCL2Q9UPR0 1127 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 SLC8A2Q9UPR5 921 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 FIS1Q9Y3D6 152 aa3.72□□□□□ -1.81
GEN1-201ENST00000317402 KRIT1O00522 736 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 CCNE2O96020 404 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 HOXC6P09630 235 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 CPB1P15086 417 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 DRD4P21917 467 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 CCNE1P24864 410 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 EPHB2P29323 1055 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 PPIDQ08752 370 aaKnown RBP3.71□□□□□ -1.81
GEN1-201ENST00000317402 ZNF252P-AS1Q0IIN9 211 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 STRN3Q13033 797 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 TMED2Q15363 201 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 FXNQ16595 210 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 RBM20Q5T481 1227 aaKnown RBP3.71□□□□□ -1.81
GEN1-201ENST00000317402 LPCAT4Q643R3 524 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 MICALL2Q8IY33 904 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 TAS1R2Q8TE23 839 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 SCG3Q8WXD2 468 aaKnown RBP3.71□□□□□ -1.81
GEN1-201ENST00000317402 RIC8AQ9NPQ8 531 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 HCSTQ9UBK5 93 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 ZHX2Q9Y6X8 837 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 A6NL46 340 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 KRT36O76013 467 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 SSTR1P30872 391 aa3.71□□□□□ -1.81
GEN1-201ENST00000317402 RPA3P35244 121 aaPredicted RBP3.71□□□□□ -1.81
GEN1-201ENST00000317402 CD300CQ08708 224 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms