RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 COL11A1P12107 1806 aaPredicted RBP13.89□□□□□ -0.19
SKA3-202ENST00000314759 hCG_2014768A0A024R1R8 64 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 BCLAF3A2AJT9 711 aaKnown RBP13.88□□□□□ -0.19
SKA3-202ENST00000314759 HNRNPRO43390 633 aaKnown RBP13.88□□□□□ -0.19
SKA3-202ENST00000314759 B4GALT4O60513 344 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 PGM3O95394 542 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 GRIA1P42261 906 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 ASPHQ12797 758 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 TEDDM1Q5T9Z0 273 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 ATG14Q6ZNE5 492 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 DENND5BQ6ZUT9 1274 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 DPH6Q7L8W6 267 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 SDCCAG8Q86SQ7 713 aaPredicted RBP13.88□□□□□ -0.19
SKA3-202ENST00000314759 WDR75Q8IWA0 830 aaKnown RBP13.88□□□□□ -0.19
SKA3-202ENST00000314759 TMEM192Q8IY95 271 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 AGBL3Q8NEM8 1001 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 PCDH19Q8TAB3 1148 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 PPP1R14CQ8TAE6 165 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 ZDHHC7Q9NXF8 308 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 APOL1O14791 398 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 PEX2P28328 305 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 RPL10AP62906 217 aaKnown RBP13.88□□□□□ -0.19
SKA3-202ENST00000314759 LAMTOR4Q0VGL1 99 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 MED21Q13503 144 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 CCNIQ14094 377 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 STXBP2Q15833 593 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 SCYL2Q6P3W7 929 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 TIFABQ6ZNK6 161 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 UNC5BQ8IZJ1 945 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 SLC26A7Q8TE54 656 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 TMEM176AQ96HP8 235 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 MPP4Q96JB8 637 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 OLFM3Q96PB7 478 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 ACAD9Q9H845 621 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 DNAAF2Q9NVR5 837 aaKnown RBP13.88□□□□□ -0.19
SKA3-202ENST00000314759 CHCHD3Q9NX63 227 aaKnown RBP13.88□□□□□ -0.19
SKA3-202ENST00000314759 IL1RAPL1Q9NZN1 696 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 EMCNQ9ULC0 261 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 ADAMTS5Q9UNA0 930 aa13.88□□□□□ -0.19
SKA3-202ENST00000314759 CCNT2O60583 730 aaKnown RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 SIN3BO75182 1162 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 CILPO75339 1184 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 FGF3P11487 239 aaPredicted RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 VCLP18206 1134 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 KCNA4P22459 653 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 L1CAMP32004 1257 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 ICAM3P32942 547 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 STAT5BP51692 787 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 OAZ1P54368 228 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 EPHB1P54762 984 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 CA9Q16790 459 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 MAVSQ7Z434 540 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 MAP7D3Q8IWC1 876 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 EFCAB3Q8N7B9 438 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 KLHL23Q8NBE8 558 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 HIPK4Q8NE63 616 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 ZNF668Q96K58 619 aaPredicted RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 QTRT2Q9H974 415 aaKnown RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 MYOZ2Q9NPC6 264 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 APOBEC2Q9Y235 224 aaKnown RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 PARP14Q460N5 1801 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 PDE5AO76074 875 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 EGFRP00533 1210 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 PENKP01210 267 aaPredicted RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 PROCP04070 461 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 ASLP04424 464 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 CXCL8P10145 99 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 TGM2P21980 687 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 SLC1A6P48664 564 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 SERPINB9P50453 376 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
SKA3-202ENST00000314759 SLC9A4Q6AI14 798 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 OR6B2Q6IFH4 312 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 PGM2L1Q6PCE3 622 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 FBXL19Q6PCT2 694 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 SIKE1Q9BRV8 207 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 SHCBP1LQ9BZQ2 653 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 PTPRHQ9HD43 1115 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 MOCS1Q9NZB8 636 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 SLC17A6Q9P2U8 582 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 RPS6KL1Q9Y6S9 549 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 B4GALT5O43286 388 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 KLHL2O95198 593 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 UQCRBP14927 111 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 UBA1P22314 1058 aaKnown RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 PROZP22891 400 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 ADORA2AP29274 412 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 COPAP53621 1224 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 PDK2Q15119 407 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 CCDC14Q49A88 953 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 MPZL3Q6UWV2 235 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 FAM183BPQ6ZVS7 135 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 LRRC71Q8N4P6 559 aa13.87□□□□□ -0.19
SKA3-202ENST00000314759 CCDC124Q96CT7 223 aaKnown RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 HEXIM2Q96MH2 286 aaKnown RBP13.87□□□□□ -0.19
SKA3-202ENST00000314759 TEX13BQ9BXU2 312 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms