RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 MAML1Q92585 1016 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 HSFY1Q96LI6 401 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 ETNK1Q9HBU6 452 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 KBTBD13C9JR72 458 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 FAM72CH0Y354 149 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 BDNFP23560 247 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 CDC25CP30307 473 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 STIP1P31948 543 aaKnown RBP12.87□□□□□ -0.35
RNF4-201ENST00000314289 TM4SF4P48230 202 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 LPIN1Q14693 890 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 DPYSL2Q16555 572 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 FAM72AQ5TYM5 149 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 FAM72DQ6L9T8 149 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 PCGF5Q86SE9 256 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 FAM35AQ86V20 835 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 FAM72BQ86X60 149 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
RNF4-201ENST00000314289 FAM124BQ9H5Z6 455 aaPredicted RBP12.87□□□□□ -0.35
RNF4-201ENST00000314289 EURLQ9NYK6 297 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
RNF4-201ENST00000314289 I6L893 689 aaPredicted RBP12.86□□□□□ -0.35
RNF4-201ENST00000314289 GPR182O15218 404 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 FAM155BO75949 473 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 FYNP06241 537 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 NCAM1P13591 858 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 ACADSBP45954 432 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
RNF4-201ENST00000314289 MGAT3Q09327 533 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 UPP1Q16831 310 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 SLC25A52Q3SY17 297 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 NUGGCQ68CJ6 796 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 TRPM8Q7Z2W7 1104 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 TEKT4Q8WW24 435 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
RNF4-201ENST00000314289 PGLYRP2Q96PD5 576 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 ZNF670Q9BS34 389 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 TRPV6Q9H1D0 765 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 TMLHEQ9NVH6 421 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 DTLQ9NZJ0 730 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 OR4Q2P0C623 313 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 STX2P32856 288 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 BSPRYQ5W0U4 402 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 NCBP2-AS2Q69YL0 99 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 FAM47EQ6ZV65 393 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 CCNYQ8ND76 341 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 MAGEC3Q8TD91 643 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 TTC25Q96NG3 672 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 TRABDQ9H4I3 376 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 SLC38A7Q9NVC3 462 aa12.86□□□□□ -0.35
RNF4-201ENST00000314289 MFSD11O43934 449 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 TRPA1O75762 1119 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 ATP5DP30049 168 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 KCNJ2P63252 427 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 CRADDP78560 199 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 DEUP1Q05D60 604 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 ITGA7Q13683 1181 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 KCNJ11Q14654 390 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 PRPF39Q86UA1 669 aaKnown RBP12.85□□□□□ -0.35
RNF4-201ENST00000314289 TRABD2AQ86V40 505 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 PAFAH2Q99487 392 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 FOXP3Q9BZS1 431 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 LGALS13Q9UHV8 139 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 NUDT5Q9UKK9 219 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 B4GALT3O60512 393 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 KPNA6O60684 536 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 TCEA3O75764 348 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 UBOX5O94941 541 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 ABHD2P08910 425 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 KRT4P19013 534 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 TGM2P21980 687 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 RPA3P35244 121 aaPredicted RBP12.85□□□□□ -0.35
RNF4-201ENST00000314289 ARL4AP40617 200 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 AP1B1Q10567 949 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 OLIG2Q13516 323 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 TLDC1Q6P9B6 456 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 MPP5Q8N3R9 675 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 KIF2BQ8N4N8 673 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 DEPDC1BQ8WUY9 529 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 MYLPFQ96A32 169 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 RTP3Q9BQQ7 232 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 FRMD8P1Q9BZ68 369 aaPredicted RBP12.85□□□□□ -0.35
RNF4-201ENST00000314289 FZD10Q9ULW2 581 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 SLC12A4Q9UP95 1085 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 MAD1L1Q9Y6D9 718 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 WDR91A4D1P6 747 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 VAV1P15498 845 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
RNF4-201ENST00000314289 CRYMQ14894 314 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 KBTBD12Q3ZCT8 623 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 LRRTM3Q86VH5 581 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 HACE1Q8IYU2 909 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 SCAMP5Q8TAC9 235 aa12.85□□□□□ -0.35
RNF4-201ENST00000314289 ALG13Q9NP73 1137 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms