RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 HCRTO43612 131 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SNX2O60749 519 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 CHEK2O96017 543 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 OR4Q2P0C623 313 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ERCC2P18074 760 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 RAB27AP51159 221 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GEMP55040 296 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GIPC2Q8TF65 315 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 PCDH18Q9HCL0 1135 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 OR12D3Q9UGF7 316 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ASGR1P07306 291 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NPR3P17342 541 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SERPINB4P48594 390 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 HARS2P49590 506 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SLC45A4Q5BKX6 768 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 DDIASQ8IXT1 998 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SOCS4Q8WXH5 440 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NOD2Q9HC29 1040 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 LRRC4CQ9HCJ2 640 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 AFF4Q9UHB7 1163 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 E5RI56 91 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ANXA9O76027 345 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NFKB1P19838 968 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GBE1Q04446 702 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 HIC1Q14526 733 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 TMEM120AQ9BXJ8 343 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NRDE2Q9H7Z3 1164 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SNX3O60493 162 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SKIP12755 728 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NQO1P15559 274 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 CCR1P32246 355 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 FLT3LGP49771 235 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 MGAT5Q09328 741 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SEPT8Q92599 483 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NT5MQ9NPB1 228 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NMRK2Q9NPI5 230 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 RALBP11234 206 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 PPARGP37231 505 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ATXN1P54253 815 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 FKBP1BP68106 108 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 VEPH1Q14D04 833 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SH3PXD2AQ5TCZ1 1133 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ZNF572Q7Z3I7 529 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ASIC4Q96FT7 647 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SMARCD1Q96GM5 515 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SDCBP2Q9H190 292 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 LTBP3Q9NS15 1303 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 MAP3K7O43318 606 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 KCNA4P22459 653 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ITIH4Q14624 930 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 RABGAP1LQ5R372 815 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 TMEM130Q8N3G9 435 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GBP5Q96PP8 586 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 RNF103O00237 685 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GDF10P55107 478 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 TARBP2Q15633 366 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ZNF280DQ6N043 979 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 PTAR1Q7Z6K3 402 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 MTBPQ96DY7 904 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 P2RY11Q96G91 374 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 CHST12Q9NRB3 414 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ZNF142P52746 1687 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 BUD23O43709 281 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GPD2P43304 727 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ALDH7A1P49419 539 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NFE2Q16621 373 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 N4BP2L1Q5TBK1 243 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ATXN2LQ8WWM7 1075 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ANGPTL2Q9UKU9 493 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 TSPAN3O60637 253 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NOMO1Q15155 1222 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GCNAQ96QF7 691 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GPR88Q9GZN0 384 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NT5C1B-RDH14C9J2C7 533 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 IL1R2P27930 398 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 NDUFV1P49821 464 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 FASTKD3Q14CZ7 662 aaKnown RBP6.36□□□□□ -1.39
PRKDC-201ENST00000314191 PMF1Q6P1K2 205 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 TMEM86AQ8N2M4 240 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 STRA6Q9BX79 667 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 SLCO1B3Q9NPD5 702 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 PPEF2O14830 753 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 PAPSS1O43252 624 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-201ENST00000314191 DGKIO75912 1065 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 CREB1P16220 341 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 CDH17Q12864 832 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 FNBP1LQ5T0N5 605 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 ARHGAP18Q8N392 663 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 EGFL8Q99944 293 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 CYP4F12Q9HCS2 524 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 ADA2Q9NZK5 511 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 CPA3P15088 417 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 DNAJB2P25686 324 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 SOX11P35716 441 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 TUBP50607 506 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 WNT7BP56706 349 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 PYROXD2Q8N2H3 581 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 STYXL1Q9Y6J8 313 aa6.36□□□□□ -1.39
PRKDC-201ENST00000314191 SKAP2O75563 359 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms