RNA–Protein interactions for RNA: ENST00000311916.6

TWNK-201, Transcript of twinkle mtDNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWNK, Length 3,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-201ENST00000311916 PTPN4P29074 926 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 MXRA7P84157 204 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 NME3Q13232 169 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 TAF11Q15544 211 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 DCAF6Q58WW2 860 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 SLC27A1Q6PCB7 646 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 UNC5AQ6ZN44 842 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 RFX8Q6ZV50 586 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 CAND1Q86VP6 1230 aaKnown RBP12.12□□□□□ -0.47
TWNK-201ENST00000311916 SLC2A14Q8TDB8 520 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 MIEF2Q96C03 454 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 MED10Q9BTT4 135 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 CDHR5Q9HBB8 845 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 ARL8BQ9NVJ2 186 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 TTLL3Q9Y4R7 772 aa12.12□□□□□ -0.47
TWNK-201ENST00000311916 SCN1AP35498 2009 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 PDHXO00330 501 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 T-ENOLP0DO92 83 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 CYP2C9P11712 490 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 GOT1P17174 413 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 BDNFP23560 247 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SULT1E1P49888 294 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ERFP50548 548 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SLC8A3P57103 927 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 DGKDQ16760 1214 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SOWAHAQ2M3V2 549 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 USP50Q70EL3 339 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 NT5DC4Q86YG4 428 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 CCDC185Q8N715 623 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SLC35F5Q8WV83 523 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 C17orf50Q8WW18 174 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 INPP5DQ92835 1189 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 LGMNQ99538 433 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ZNF670Q9BS34 389 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 POPDC2Q9HBU9 364 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 TXNDC16Q9P2K2 825 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 MTO1Q9Y2Z2 717 aaKnown RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 MFHAS1Q9Y4C4 1052 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 BCLAF3A2AJT9 711 aaKnown RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 ENTPD5O75356 428 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 FBXO47Q5MNV8 452 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ZNF618Q5T7W0 954 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 NOTUMQ6P988 496 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ZCCHC23Q6ZST2 131 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 TMEM110Q86TL2 294 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
TWNK-201ENST00000311916 TTC8Q8TAM2 541 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 TEKT4Q8WW24 435 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SLC7A6OSQ96CW6 309 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 NSL1Q96IY1 281 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 FRMD8Q9BZ67 464 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 ZNF395Q9H8N7 513 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.11□□□□□ -0.47
TWNK-201ENST00000311916 RABL2AQ9UBK7 228 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 CITO14578 2027 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 E2F8A0AVK6 867 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SLC15A5A6NIM6 579 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 CCDC22O60826 627 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 HUS1O60921 280 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 CELF2O95319 508 aaKnown RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 CSH1P0DML2 217 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 CSH2P0DML3 217 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SMPD1P17405 629 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ACAT1P24752 427 aaKnown RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 L1CAMP32004 1257 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 BCAT1P54687 386 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 PDE1BQ01064 536 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 SLC10A2Q12908 348 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 PARP6Q2NL67 630 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 ATG16L1Q676U5 607 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 TTC7BQ86TV6 843 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 FAM167BQ9BTA0 163 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 LRRC4Q9HBW1 653 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 LMCD1Q9NZU5 365 aa12.11□□□□□ -0.47
TWNK-201ENST00000311916 NKX1-2Q9UD57 310 aaPredicted RBP12.11□□□□□ -0.47
TWNK-201ENST00000311916 WDR27A2RRH5 827 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 CAPN9O14815 690 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 PYGLP06737 847 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 NEK3P51956 506 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
TWNK-201ENST00000311916 UNC5BQ8IZJ1 945 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 DEFB106AQ8N104 65 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 APPL2Q8NEU8 664 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 GSDMBQ8TAX9 411 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 TFB1MQ8WVM0 346 aaKnown RBP12.1□□□□□ -0.47
TWNK-201ENST00000311916 PRR11Q96HE9 360 aaPredicted RBP12.1□□□□□ -0.47
TWNK-201ENST00000311916 AGAP3Q96P47 875 aa12.1□□□□□ -0.47
TWNK-201ENST00000311916 CSPG4P5Q96PW8 444 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms