RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 KPNA1P52294 538 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 ZNF143P52747 638 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 ATXN1P54253 815 aaKnown RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 TBX4P57082 545 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 CCZ1BP86790 482 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 CCZ1P86791 482 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 NNTQ13423 1086 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 TDGQ13569 410 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 ZC3H12AQ5D1E8 599 aaKnown RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 CC2D1AQ6P1N0 951 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 HTR3DQ70Z44 454 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 BNIPLQ7Z465 357 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 BBS7Q8IWZ6 715 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 YAF2Q8IY57 180 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 DEPDC1BQ8WUY9 529 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 PLD4Q96BZ4 506 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 SLC39A13Q96H72 371 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 UHRF1Q96T88 793 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 LINC00597Q9H2U6 94 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 PIGVQ9NUD9 493 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 WNT6Q9Y6F9 365 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 NARSO43776 548 aaKnown RBP13.41□□□□□ -0.26
APTX-201ENST00000309615 IPO7O95373 1038 aaKnown RBP13.41□□□□□ -0.26
APTX-201ENST00000309615 PTMAP06454 111 aaKnown RBP13.41□□□□□ -0.26
APTX-201ENST00000309615 GDI1P31150 447 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 HARS2P49590 506 aaKnown RBP13.41□□□□□ -0.26
APTX-201ENST00000309615 RING1Q06587 406 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 ZNF252P-AS1Q0IIN9 211 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 TRIM68Q6AZZ1 485 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 Q6ZNB5 142 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 DENND1CQ8IV53 801 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 OSCP1Q8WVF1 389 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 PGAP3Q96FM1 320 aaPredicted RBP13.41□□□□□ -0.26
APTX-201ENST00000309615 BTBD6Q96KE9 485 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 THG1LQ9NWX6 298 aaKnown RBP13.41□□□□□ -0.26
APTX-201ENST00000309615 CTTNBP2NLQ9P2B4 639 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 INTUQ9ULD6 942 aa13.41□□□□□ -0.26
APTX-201ENST00000309615 RCCD1A6NED2 376 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ARHGAP6O43182 974 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 CCP110O43303 1012 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 RDXP35241 583 aaKnown RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 DEUP1Q05D60 604 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 TNK2Q07912 1038 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ZNF564Q8TBZ8 553 aaPredicted RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 CENPIQ92674 756 aaPredicted RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 RNF34Q969K3 372 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 FAM83CQ9BQN1 747 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 CNPY3Q9BT09 278 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 DUS2Q9NX74 493 aaKnown RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 MUTYHQ9UIF7 546 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 LSM7Q9UK45 103 aaKnown RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 AGO1Q9UL18 857 aaKnown RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 A0A0C4DFX4 3053 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ARNTLO00327 626 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 CHADO15335 359 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ENDOD1O94919 500 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 SLC34A2O95436 690 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 MOCS2O96007 188 aaPredicted RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 F9P00740 461 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ARSAP15289 507 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 PSMA2P25787 234 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 CCR1P32246 355 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 CXCR3P49682 368 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 HDAC4P56524 1084 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 CCDC173Q0VFZ6 552 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ARHGAP29Q52LW3 1261 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 NUGGCQ68CJ6 796 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 UNC45BQ8IWX7 931 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 SLC35G2Q8TBE7 412 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 FNIP1Q8TF40 1166 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 ZNF830Q96NB3 372 aaPredicted RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 EBF3Q9H4W6 596 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 LUC7LQ9NQ29 371 aaKnown RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 UVRAGQ9P2Y5 699 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 XPO7Q9UIA9 1087 aaKnown RBP13.4□□□□□ -0.26
APTX-201ENST00000309615 SORCS3Q9UPU3 1222 aa13.4□□□□□ -0.26
APTX-201ENST00000309615 OTOL1A6NHN0 477 aaPredicted RBP13.39□□□□□ -0.27
APTX-201ENST00000309615 KCNU1A8MYU2 1149 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 KRT83P78385 493 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 EML3Q32P44 896 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 SND1Q7KZF4 910 aaKnown RBP eCLIP13.39□□□□□ -0.27
APTX-201ENST00000309615 STRADAQ7RTN6 431 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 FAM131BQ86XD5 332 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 ADGRG2Q8IZP9 1017 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 KIAA1958Q8N8K9 716 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 PPP1R9BQ96SB3 815 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 DCLK3Q9C098 648 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 LACRTQ9GZZ8 138 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 KCNF1Q9H3M0 494 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 WDCPQ9H6R7 721 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 ANLNQ9NQW6 1124 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 TMPRSS4Q9NRS4 437 aa13.39□□□□□ -0.27
APTX-201ENST00000309615 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.39□□□□□ -0.27
APTX-201ENST00000309615 GTSE1Q9NYZ3 720 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms