RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 NDUFA10O95299 355 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 ALADP13716 330 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 GLULP15104 373 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 ABCB4P21439 1286 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 RDXP35241 583 aaKnown RBP18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 RFC1P35251 1148 aaPredicted RBP18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 FLT3P36888 993 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 SULT1E1P49888 294 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 KRT83P78385 493 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 ZXDBP98169 803 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 EIF4EBP2Q13542 120 aaPredicted RBP18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 ACAP1Q15027 740 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 RHOT2Q8IXI1 618 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 CPA6Q8N4T0 437 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 CSGALNACT1Q8TDX6 532 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 RXFP2Q8WXD0 754 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 RSAD2Q8WXG1 361 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 SLC39A13Q96H72 371 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 CNPY3Q9BT09 278 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 THAP2Q9H0W7 228 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 GKN1Q9NS71 199 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 DENND4CQ5VZ89 1909 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 ARHGAP6O43182 974 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 ENDOD1O94919 500 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 ADH1CP00326 375 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 CORO1AP31146 461 aaKnown RBP18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 DEUP1Q05D60 604 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 GRM2Q14416 872 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 Q6ZNB5 142 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 ATP6V0D2Q8N8Y2 350 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 RNF34Q969K3 372 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 BTN2A3PQ96KV6 586 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 LRRC3BQ96PB8 259 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 RPP25Q9BUL9 199 aaKnown RBP18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 PLA2G2FQ9BZM2 168 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 SPTLC3Q9NUV7 552 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 STOML2Q9UJZ1 356 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 ANAPC1Q9H1A4 1944 aa18.62■□□□□ 0.57
SSSCA1-201ENST00000309328 VCANP13611 3396 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 TMEM191CA6NGB0 347 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 MSI1O43347 362 aaKnown RBP18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 DCXO43602 365 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 GREM1O60565 184 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 IRF1P10914 325 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 CXCR3P49682 368 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 AIF1P55008 147 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 ITPRIPL2Q3MIP1 535 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 ARL13BQ3SXY8 428 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 BNIPLQ7Z465 357 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 CPXM2Q8N436 756 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 CENPIQ92674 756 aaPredicted RBP18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 PDLIM2Q96JY6 352 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 FCRL2Q96LA5 508 aaPredicted RBP18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 C8orf33Q9H7E9 229 aaPredicted RBP18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 MYO1AQ9UBC5 1043 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 WNT16Q9UBV4 365 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 IP6K2Q9UHH9 426 aa18.61■□□□□ 0.57
SSSCA1-201ENST00000309328 SOWAHDA6NJG2 315 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 MYO1FO00160 1098 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 ARNTLO00327 626 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 MAGEA1P43355 309 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 RPL7AP62424 266 aaKnown RBP18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 NME3Q13232 169 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 RUNX3Q13761 415 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 PIGHQ14442 188 aaPredicted RBP18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 TCEAL1Q15170 157 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 EML3Q32P44 896 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 CCDC14Q49A88 953 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 ADGRF1Q5T601 910 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 TMEM139Q8IV31 216 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 LRRC8AQ8IWT6 810 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 FAM217AQ8IXS0 508 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 EMC1Q8N766 993 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 ZNF557Q8N988 423 aaPredicted RBP18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 TTC16Q8NEE8 873 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 JOSD2Q8TAC2 188 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 ADAM32Q8TC27 787 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 RFFLQ8WZ73 363 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 SHDQ96IW2 340 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 CFAP57Q96MR6 1250 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 TBCBQ99426 244 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 NUP85Q9BW27 656 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 WDCPQ9H6R7 721 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 CTTNBP2NLQ9P2B4 639 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 MUTYHQ9UIF7 546 aa18.6■□□□□ 0.57
SSSCA1-201ENST00000309328 TYW5A2RUC4 315 aaKnown RBP18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 ATMINO43313 823 aaPredicted RBP18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 RNF8O76064 485 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 CYBBP04839 570 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 HMBSP08397 361 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 PSMA2P25787 234 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 PRKCQQ04759 706 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 PREPLQ4J6C6 727 aaPredicted RBP18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 PHLDB2Q86SQ0 1253 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 DENND1CQ8IV53 801 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 BBS7Q8IWZ6 715 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 ADGRG2Q8IZP9 1017 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 NIPA2Q8N8Q9 360 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 RIN3Q8TB24 985 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 ZNF564Q8TBZ8 553 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms