RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SCNN1BP51168 640 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 GTF2BQ00403 316 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 CYLC2Q14093 348 aaPredicted RBP16.37■□□□□ 0.21
USP42-201ENST00000306177 GALNTL6Q49A17 601 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SLC22A9Q8IVM8 553 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 B4GALNT2Q8NHY0 566 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 RMND5AQ9H871 391 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 TRPV2Q9Y5S1 764 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 UBIAD1Q9Y5Z9 338 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SNCAIPQ9Y6H5 919 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 ZSCAN5CA6NGD5 496 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 HACD1B0YJ81 288 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 PECAM1P16284 738 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 PGAM1P18669 254 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 RENBPP51606 427 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 TAGLN3Q9UI15 199 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 RAD54BQ9Y620 910 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 TFE3P19532 575 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 MIPP30301 263 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 PPP3CAQ08209 521 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 TP53BP2Q13625 1128 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 COL9A3Q14050 684 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 ACBD5Q5T8D3 534 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 BNC2Q6ZN30 1099 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 PTAR1Q7Z6K3 402 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 ADCK1Q86TW2 530 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 KATNAL2Q8IYT4 538 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 GANQ9H2C0 597 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 GDF3Q9NR23 364 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 SLIT3O75094 1523 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 IRF6O14896 467 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 KLRC4O43908 158 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 ALOX15P16050 662 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 AMPD1P23109 780 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 GP5P40197 560 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 CD151P48509 253 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 ATN1P54259 1190 aaPredicted RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 POU6F1Q14863 301 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 GRTP1Q5TC63 336 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 MTDHQ86UE4 582 aaKnown RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 OOSP2Q86WS3 158 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 SCUBE1Q8IWY4 988 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 TDRD5Q8NAT2 981 aaKnown RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 ABHD8Q96I13 439 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 PRKD2Q9BZL6 878 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 XPNPEP3Q9NQH7 507 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 PCDHGC5Q9Y5F6 944 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 TBKBP1A7MCY6 615 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 ALBP02768 609 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 ACADSP16219 412 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 PRIM2P49643 509 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 MRPS35P82673 323 aaKnown RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 RCN1Q15293 331 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 FSCN1Q16658 493 aaKnown RBP16.36■□□□□ 0.21
USP42-201ENST00000306177 FUT11Q495W5 492 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 WDR59Q6PJI9 974 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 PLD3Q8IV08 490 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 BBS7Q8IWZ6 715 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 FAM136AQ96C01 138 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 DNAJC18Q9H819 358 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 UMODL1Q5DID0 1318 aa16.36■□□□□ 0.21
USP42-201ENST00000306177 APOC4-APOC2K7ER74 178 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 APOC2P02655 101 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 FGRP09769 529 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 TPBGLP0DKB5 382 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 NPY2RP49146 381 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 ILF2Q12905 390 aaKnown RBP16.35■□□□□ 0.21
USP42-201ENST00000306177 ITGA9Q13797 1035 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 RASA2Q15283 850 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
USP42-201ENST00000306177 CREG2Q8IUH2 290 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 P3H2Q8IVL5 708 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 EPS8L1Q8TE68 723 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 DNAJC19Q96DA6 116 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 SYNDIG1Q9H7V2 258 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 TUBP50607 506 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 DLG4P78352 724 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 IL17AQ16552 155 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 CCT7Q99832 543 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 CEP41Q9BYV8 373 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 NINJ2Q9NZG7 142 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 DNPEPQ9ULA0 475 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 DTNAQ9Y4J8 743 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 DEAF1O75398 565 aaPredicted RBP16.35■□□□□ 0.21
USP42-201ENST00000306177 DSG1Q02413 1049 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 SPANXN3Q5MJ09 141 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 RETSATQ6NUM9 610 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 HDAC7Q8WUI4 952 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 H2AFY2Q9P0M6 372 aaPredicted RBP16.35■□□□□ 0.21
USP42-201ENST00000306177 PCDHB12Q9Y5F1 795 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 E5RJQ4 531 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 SFSWAPQ12872 951 aaKnown RBP16.35■□□□□ 0.21
USP42-201ENST00000306177 CCDC85BQ15834 202 aaPredicted RBP16.35■□□□□ 0.21
USP42-201ENST00000306177 C11orf96Q7Z7L8 435 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 TRIM48Q8IWZ4 208 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 TMEM86AQ8N2M4 240 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 POPDC2Q9HBU9 364 aa16.35■□□□□ 0.21
USP42-201ENST00000306177 WDR27A2RRH5 827 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms