RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PLCL2Q9UPR0 1127 aa13.73□□□□□ -0.21
TRIM56-201ENST00000306085 ICE1Q9Y2F5 2266 aa13.73□□□□□ -0.21
TRIM56-201ENST00000306085 TEX46H3BTG2 121 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 SEC24AO95486 1093 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 UQCRBP14927 111 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 HIPK1Q86Z02 1210 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 OR6J1Q8NGC5 347 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 COX4I2Q96KJ9 171 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 SNX6Q9UNH7 406 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 DNAJC16Q9Y2G8 782 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 IRAK3Q9Y616 596 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 LTFP02788 710 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ANXA6P08133 673 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 GJA1P17302 382 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 GCLCP48506 637 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 RGS1Q08116 209 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 NRF1Q16656 503 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 PI16Q6UXB8 463 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 STRA8Q7Z7C7 330 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 C2orf69Q8N8R5 385 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 TMEM5Q9Y2B1 443 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 RARBP10826 455 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ARHGAP15Q53QZ3 475 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 FAXCQ5TGI0 409 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 POC5Q8NA72 575 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 C7orf25Q9BPX7 421 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 NLNQ9BYT8 704 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 OSBPL5Q9H0X9 879 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ACTR8Q9H981 624 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ZNF224Q9NZL3 707 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 EDC4Q6P2E9 1401 aaKnown RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 TFECO14948 347 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 KCNJ1P48048 391 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 MTAPQ13126 283 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 CPVLQ9H3G5 476 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 PP2D1A8MPX8 630 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 HAT1O14929 419 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 LDLRP01130 860 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ERFEQ4G0M1 354 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 AKAP14Q86UN6 197 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 EXOC3L1Q86VI1 746 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ANXA9O76027 345 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 SPIRE1Q08AE8 756 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 UNC5CLQ8IV45 518 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 OSCP1Q8WVF1 389 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 SIPA1Q96FS4 1042 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ADPRHL2Q9NX46 363 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 RB1P06400 928 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 GTF2H1P32780 548 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 FAPQ12884 760 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 DHFR2Q86XF0 187 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 FNDC5Q8NAU1 212 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 MLH3Q9UHC1 1453 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 CYP27B1O15528 508 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 CCNT2O60583 730 aaKnown RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 RNASEH1O60930 286 aaKnown RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ULK1O75385 1050 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 AP1G2O75843 785 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 CYP2R1Q6VVX0 501 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 MTSS1O43312 755 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 CST8O60676 142 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 ENDOD1O94919 500 aa13.72□□□□□ -0.21
TRIM56-201ENST00000306085 TUBA8Q9NY65 449 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-201ENST00000306085 MTTPP55157 894 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 RNASE12Q5GAN4 147 aaKnown RBP13.71□□□□□ -0.21
TRIM56-201ENST00000306085 TRIM2Q9C040 744 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 PGK1P00558 417 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 GPD1P21695 349 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 WRNIP1Q96S55 665 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 MROH7Q68CQ1 1323 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 GLRA3O75311 464 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 WEE1P30291 646 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 EFNA5P52803 228 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 B3GNT6Q6ZMB0 384 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 TTC29Q8NA56 475 aaPredicted RBP13.71□□□□□ -0.21
TRIM56-201ENST00000306085 TNKS2Q9H2K2 1166 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 MT-CO1P00395 513 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 HOXD10P28358 340 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 SMU1Q2TAY7 513 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 SEC31BQ9NQW1 1179 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 PCDHB7Q9Y5E2 793 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 RP1P56715 2156 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 NMT2O60551 498 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 OR5F1O95221 314 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 SLC18A3Q16572 532 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 ART5Q96L15 291 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 OSBPL11Q9BXB4 747 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 MAPRE3Q9UPY8 281 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 PLOD2O00469 737 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 IDH2P48735 452 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms