RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SORCS3Q9UPU3 1222 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 PCDHA13Q9Y5I0 950 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 TMEM191CA6NGB0 347 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 SLC9A3R1O14745 358 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 CHADO15335 359 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 F9P00740 461 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 DESP17661 470 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 TFE3P19532 575 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 CORO1AP31146 461 aaKnown RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 PTPN9P43378 593 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 ZNF143P52747 638 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 DEUP1Q05D60 604 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 NUGGCQ68CJ6 796 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 SND1Q7KZF4 910 aaKnown RBP eCLIP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 UNC45BQ8IWX7 931 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 OSCP1Q8WVF1 389 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 ZFYVE19Q96K21 471 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 TBC1D14Q9P2M4 693 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 WNT6Q9Y6F9 365 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 IGLV3-27P01718 113 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 IFNAR2P48551 515 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 CDO1Q16878 200 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 C15orf59Q2T9L4 293 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 OTUD1Q5VV17 481 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 DENND1CQ8IV53 801 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 PGAP3Q96FM1 320 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 SLC39A13Q96H72 371 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 FCRL2Q96LA5 508 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-201ENST00000303450 ADAM33Q9BZ11 813 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 TMEM51Q9NW97 253 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 CALCOCO1Q9P1Z2 691 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 CTTNBP2NLQ9P2B4 639 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 ZNF510Q9Y2H8 683 aa25.47■■□□□ 1.67
HOXC9-201ENST00000303450 NCOR1O75376 2440 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 VCANP13611 3396 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 GREM1O60565 184 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 APOEP02649 317 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 KLKB1P03952 638 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 SLC2A3P11169 496 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 EIF4EBP2Q13542 120 aaPredicted RBP25.46■■□□□ 1.67
HOXC9-201ENST00000303450 ZC3H12AQ5D1E8 599 aaKnown RBP25.46■■□□□ 1.67
HOXC9-201ENST00000303450 BBS7Q8IWZ6 715 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 IRF7Q92985 503 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 CNPY3Q9BT09 278 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 PIGVQ9NUD9 493 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.46■■□□□ 1.67
HOXC9-201ENST00000303450 UVRAGQ9P2Y5 699 aa25.46■■□□□ 1.67
HOXC9-201ENST00000303450 ARHGAP6O43182 974 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 NARSO43776 548 aaKnown RBP25.45■■□□□ 1.66
HOXC9-201ENST00000303450 SRFP11831 508 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 PSMA2P25787 234 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 CCR1P32246 355 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 RDXP35241 583 aaKnown RBP25.45■■□□□ 1.66
HOXC9-201ENST00000303450 PDGFRLQ15198 375 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 Q6ZNB5 142 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 ASIC4Q96FT7 647 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 FAM83CQ9BQN1 747 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 TRIM7Q9C029 511 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 LINC00597Q9H2U6 94 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 AGO1Q9UL18 857 aaKnown RBP25.45■■□□□ 1.66
HOXC9-201ENST00000303450 PAXBP1Q9Y5B6 917 aa25.45■■□□□ 1.66
HOXC9-201ENST00000303450 KRT83P78385 493 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 OGDHQ02218 1023 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 TRIM68Q6AZZ1 485 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 STRADAQ7RTN6 431 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 ACRBPQ8NEB7 543 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 ZNF564Q8TBZ8 553 aaPredicted RBP25.44■■□□□ 1.66
HOXC9-201ENST00000303450 FNIP1Q8TF40 1166 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 FAM172AQ8WUF8 416 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 OTUB2Q96DC9 234 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 SLC12A6Q9UHW9 1150 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 MUTYHQ9UIF7 546 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 ANAPC7Q9UJX3 599 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 DUSP12Q9UNI6 340 aa25.44■■□□□ 1.66
HOXC9-201ENST00000303450 CCP110O43303 1012 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 ENDOD1O94919 500 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 MOCS2O96007 188 aaPredicted RBP25.43■■□□□ 1.66
HOXC9-201ENST00000303450 CXCR3P49682 368 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 PPP2R5DQ14738 602 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 SH3PXD2AQ5TCZ1 1133 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 BNIPLQ7Z465 357 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 CENPIQ92674 756 aaPredicted RBP25.43■■□□□ 1.66
HOXC9-201ENST00000303450 ATP2A3Q93084 1043 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 EBF3Q9H4W6 596 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 WDCPQ9H6R7 721 aa25.43■■□□□ 1.66
HOXC9-201ENST00000303450 KIF26AQ9ULI4 1882 aaPredicted RBP25.43■■□□□ 1.66
HOXC9-201ENST00000303450 SLC11A2P49281 568 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 ATXN1P54253 815 aaKnown RBP25.42■■□□□ 1.66
HOXC9-201ENST00000303450 PFKPQ01813 784 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 CCDC173Q0VFZ6 552 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 EML3Q32P44 896 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 RHOT2Q8IXI1 618 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 ATP6V0D2Q8N8Y2 350 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 SLC35G2Q8TBE7 412 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 DESI2Q9BSY9 194 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 SLC2A4RGQ9NR83 387 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 REXO2Q9Y3B8 237 aaKnown RBP25.42■■□□□ 1.66
HOXC9-201ENST00000303450 MYO1FO00160 1098 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 NFATC1O95644 943 aa25.42■■□□□ 1.66
HOXC9-201ENST00000303450 LATS1O95835 1130 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms