RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CHMP6Q96FZ7 201 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 KCNK16Q96T55 309 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 DHRS4Q9BTZ2 278 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 WDR6Q9NNW5 1121 aaKnown RBP20.12■□□□□ 0.81
HOXC4-201ENST00000303406 RAB6BQ9NRW1 208 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 TMEM51Q9NW97 253 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 CTNNAL1Q9UBT7 734 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 PHF24Q9UPV7 400 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 INPP5FQ9Y2H2 1132 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 INHAP05111 366 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 AMPD1P23109 780 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 MAP2K2P36507 400 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 CACNA2D1P54289 1103 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 SEMA3BQ13214 749 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 DPYSQ14117 519 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 KCNT2Q6UVM3 1135 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 C4orf50Q6ZRC1 276 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 GPRIN1Q7Z2K8 1008 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 RTN4RL1Q86UN2 441 aaPredicted RBP20.11■□□□□ 0.81
HOXC4-201ENST00000303406 TFB1MQ8WVM0 346 aaKnown RBP20.11■□□□□ 0.81
HOXC4-201ENST00000303406 STARD7Q9NQZ5 370 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 PIGVQ9NUD9 493 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 TMEM30AQ9NV96 361 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 PSMC3IPQ9P2W1 217 aaPredicted RBP20.11■□□□□ 0.81
HOXC4-201ENST00000303406 RABGEF1Q9UJ41 708 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 TEX264Q9Y6I9 313 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 PTPRDP23468 1912 aa20.11■□□□□ 0.81
HOXC4-201ENST00000303406 ARVCFO00192 962 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 TRPA1O75762 1119 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 GSTA2P09210 222 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 USP17L7P0C7H9 530 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 BRAFP15056 766 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 GLUD2P49448 558 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 GEMIN4P57678 1058 aaKnown RBP20.1■□□□□ 0.81
HOXC4-201ENST00000303406 PITX1P78337 314 aaPredicted RBP20.1■□□□□ 0.81
HOXC4-201ENST00000303406 GAD2Q05329 585 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 MBTPS1Q14703 1052 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 ARL13BQ3SXY8 428 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 BBS9Q3SYG4 887 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 HEATR6Q6AI08 1181 aaKnown RBP20.1■□□□□ 0.81
HOXC4-201ENST00000303406 PDZD4Q76G19 769 aaPredicted RBP20.1■□□□□ 0.81
HOXC4-201ENST00000303406 TRABD2AQ86V40 505 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 ANKMY2Q8IV38 441 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 PALM2Q8IXS6 379 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 CYP4X1Q8N118 509 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 VPS52Q8N1B4 723 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 SLC7A14Q8TBB6 771 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 LINC01599Q8WXQ3 324 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 ZNF317Q96PQ6 595 aaPredicted RBP20.1■□□□□ 0.81
HOXC4-201ENST00000303406 FERMT1Q9BQL6 677 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 WDR83Q9BRX9 315 aaKnown RBP20.1■□□□□ 0.81
HOXC4-201ENST00000303406 TRPV6Q9H1D0 765 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 ELAC1Q9H777 363 aaKnown RBP20.1■□□□□ 0.81
HOXC4-201ENST00000303406 FBXW11Q9UKB1 542 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 NLRC5Q86WI3 1866 aa20.1■□□□□ 0.81
HOXC4-201ENST00000303406 TMEM120BA0PK00 339 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 I3L4J1 428 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 DRD4P21917 467 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 FDFT1P37268 417 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 SEMA5AQ13591 1074 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 PDK1Q15118 436 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 PRKD1Q15139 912 aaPredicted RBP20.09■□□□□ 0.81
HOXC4-201ENST00000303406 NOMO2Q5JPE7 1267 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 PYROXD2Q8N2H3 581 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 OR10T2Q8NGX3 314 aa20.09■□□□□ 0.81
HOXC4-201ENST00000303406 SSU72Q9NP77 194 aaKnown RBP20.09■□□□□ 0.81
HOXC4-201ENST00000303406 A0A0A0MRY4 1105 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 EEF2KO00418 725 aaKnown RBP20.08■□□□□ 0.81
HOXC4-201ENST00000303406 PPP1R12AO14974 1030 aaPredicted RBP20.08■□□□□ 0.81
HOXC4-201ENST00000303406 DCLK1O15075 740 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 PRPF4O43172 522 aaKnown RBP eCLIP20.08■□□□□ 0.81
HOXC4-201ENST00000303406 STK10O94804 968 aaKnown RBP20.08■□□□□ 0.81
HOXC4-201ENST00000303406 NCAM1P13591 858 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 CYP2C18P33260 490 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 CXCR3P49682 368 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 NRLP54845 237 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 CDK16Q00536 496 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 NME3Q13232 169 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 TMED2Q15363 201 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 ADGRD1Q6QNK2 874 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 ARHGEF18Q6ZSZ5 1173 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 C3orf62Q6ZUJ4 267 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 RFX8Q6ZV50 586 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 SRLQ86TD4 932 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 HTR3CQ8WXA8 447 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 SPATA13Q96N96 652 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 MAGEB5Q9BZ81 275 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 BRD8Q9H0E9 1235 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 ETNK1Q9HBU6 452 aa20.08■□□□□ 0.81
HOXC4-201ENST00000303406 SMG5Q9UPR3 1016 aaKnown RBP20.08■□□□□ 0.81
HOXC4-201ENST00000303406 RASA4BC9J798 803 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 RASA4O43374 803 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 MFSD11O43934 449 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 SELPP16109 830 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 BDNFP23560 247 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 ELK3P41970 407 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 MAGEA3P43357 314 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 YWHAHQ04917 246 aaPredicted RBP20.07■□□□□ 0.8
HOXC4-201ENST00000303406 CLLU1OSQ5K130 101 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 COLGALT2Q8IYK4 626 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms