RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CNR2P34972 360 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 MTIF2P46199 727 aaKnown RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 PXNP49023 591 aaPredicted RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 NRLP54845 237 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 NNTQ13423 1086 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 HSF5Q4G112 596 aaPredicted RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 PTPN20Q4JDL3 420 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 OLFML1Q6UWY5 402 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 ALLCQ8N6M5 410 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 NAT16Q8N8M0 369 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 KCNV2Q8TDN2 545 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 EPS8L1Q8TE68 723 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 DQX1Q8TE96 717 aaKnown RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 AZIN2Q96A70 460 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 ZC3H10Q96K80 434 aaKnown RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 PRICKLE1Q96MT3 831 aaPredicted RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 SLC2A13Q96QE2 648 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 HHIPQ96QV1 700 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 ACOX2Q99424 681 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 GABRG3Q99928 467 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 DNAI2Q9GZS0 605 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 ZDHHC4Q9NPG8 344 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 ARHGEF4Q9NR80 690 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 OLA1Q9NTK5 396 aaKnown RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 RASAL2Q9UJF2 1139 aa11.76□□□□□ -0.53
CLCC1-201ENST00000302500 NOCTQ9UK39 431 aaKnown RBP11.76□□□□□ -0.53
CLCC1-201ENST00000302500 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.75□□□□□ -0.53
CLCC1-201ENST00000302500 NEDD8-MDP1E9PL57 170 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 ATG13O75143 517 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 MBD3O95983 291 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 ERBB2P04626 1255 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 KRT5P13647 590 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
CLCC1-201ENST00000302500 CHRNB2P17787 502 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 GABRB2P47870 512 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 SLC8A3P57103 927 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 KDSRQ06136 332 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 DRAP1Q14919 205 aaPredicted RBP11.75□□□□□ -0.53
CLCC1-201ENST00000302500 ARHGAP44Q17R89 818 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 GEN1Q17RS7 908 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 CCDC183Q5T5S1 534 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 EGFLAMQ63HQ2 1017 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 TRNP1Q6NT89 227 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 TADA2BQ86TJ2 420 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 DENND1CQ8IV53 801 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 DHX40Q8IX18 779 aaKnown RBP11.75□□□□□ -0.53
CLCC1-201ENST00000302500 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLCC1-201ENST00000302500 MDGA1Q8NFP4 955 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 WFDC5Q8TCV5 224 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 GAB3Q8WWW8 586 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 RUBCNQ92622 972 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 NT5C3BQ969T7 300 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 BPIFA3Q9BQP9 254 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 SYT11Q9BT88 431 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 BBS2Q9BXC9 721 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 DCLK3Q9C098 648 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 TAB2Q9NYJ8 693 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 WDR35Q9P2L0 1181 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 NAALADL1Q9UQQ1 740 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 ZNF510Q9Y2H8 683 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 PCDH15Q96QU1 1955 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 CACNA1EQ15878 2313 aa11.75□□□□□ -0.53
CLCC1-201ENST00000302500 SLC12A8A0AV02 714 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 C10orf142B7Z368 130 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 IRAK2O43187 625 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 THAP12O43422 761 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 CYP11B1P15538 503 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 HLA-FP30511 346 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 MYL5Q02045 173 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 TYRO3Q06418 890 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 STX1AQ16623 288 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 C2orf27AQ580R0 203 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 PLA2G2CQ5R387 149 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 BTBD8Q5XKL5 378 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 TPGS1Q6ZTW0 290 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 NOP9Q86U38 636 aaKnown RBP11.74□□□□□ -0.53
CLCC1-201ENST00000302500 TAC4Q86UU9 113 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 SIX6OS1Q8N1H7 587 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 TXNDC5Q8NBS9 432 aaKnown RBP11.74□□□□□ -0.53
CLCC1-201ENST00000302500 ZNF397Q8NF99 534 aaPredicted RBP11.74□□□□□ -0.53
CLCC1-201ENST00000302500 ACDQ96AP0 544 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 MYO19Q96H55 970 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 ERGIC2Q96RQ1 377 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 PRMT1Q99873 361 aaKnown RBP11.74□□□□□ -0.53
CLCC1-201ENST00000302500 DUSP15Q9H1R2 295 aaPredicted RBP11.74□□□□□ -0.53
CLCC1-201ENST00000302500 ANLNQ9NQW6 1124 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 ASNSD1Q9NWL6 643 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 PLK2Q9NYY3 685 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 DEC1Q9P2X7 70 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 XPO7Q9UIA9 1087 aaKnown RBP11.74□□□□□ -0.53
CLCC1-201ENST00000302500 LSM7Q9UK45 103 aaKnown RBP11.74□□□□□ -0.53
CLCC1-201ENST00000302500 GON4LQ3T8J9 2241 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 PI4KAP42356 2102 aa11.74□□□□□ -0.53
CLCC1-201ENST00000302500 NCOR2Q9Y618 2525 aa11.73□□□□□ -0.53
CLCC1-201ENST00000302500 LGALS16A8MUM7 142 aa11.73□□□□□ -0.53
CLCC1-201ENST00000302500 KCNU1A8MYU2 1149 aa11.73□□□□□ -0.53
CLCC1-201ENST00000302500 APBB3O95704 486 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms