RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 FRMD8P1Q9BZ68 369 aaPredicted RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 FEZ2Q9UHY8 353 aaPredicted RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 DAPK3O43293 454 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 MSI1O43347 362 aaKnown RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 LILRB3O75022 631 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 PECAM1P16284 738 aaPredicted RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 GOT1P17174 413 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 VCPP55072 806 aaKnown RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 HLTFQ14527 1009 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 TRADDQ15628 312 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 RASIP1Q5U651 963 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 PQLC3Q8N755 202 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 TKTL2Q9H0I9 626 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 RXFP1Q9HBX9 757 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 ANLNQ9NQW6 1124 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 CLIC5Q9NZA1 410 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 RCOR3Q9P2K3 495 aaPredicted RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 NFU1Q9UMS0 254 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 ZNF148Q9UQR1 794 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 PLXNA4Q9HCM2 1894 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 BHMG1C9JSJ3 638 aaPredicted RBP13.47□□□□□ -0.25
CCDC7-202ENST00000302316 H3BRJ5 948 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 MCF2LO15068 1137 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 CREB3O43889 395 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 CSPG5O95196 566 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 CSH1P0DML2 217 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 CSH2P0DML3 217 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 RARGP13631 454 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 TGM2P21980 687 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 BMPR1AP36894 532 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 LMNB2Q03252 620 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 CUL1Q13616 776 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 VEPH1Q14D04 833 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 DUPD1Q68J44 220 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 MSANTD2Q6P1R3 559 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 NPNTQ6UXI9 565 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 SYDE1Q6ZW31 735 aaPredicted RBP13.47□□□□□ -0.25
CCDC7-202ENST00000302316 GSTA5Q7RTV2 222 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 DDX42Q86XP3 938 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC7-202ENST00000302316 PLD5Q8N7P1 536 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 SLC35B2Q8TB61 432 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 P3H4Q92791 437 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
CCDC7-202ENST00000302316 ALG13Q9NP73 1137 aaKnown RBP13.47□□□□□ -0.25
CCDC7-202ENST00000302316 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 FAM114A2Q9NRY5 505 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC7-202ENST00000302316 RWDD3Q9Y3V2 267 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 GREB1Q4ZG55 1949 aa13.47□□□□□ -0.25
CCDC7-202ENST00000302316 LINC01553A4QN01 128 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 I6L893 689 aaPredicted RBP13.46□□□□□ -0.25
CCDC7-202ENST00000302316 EEF2KO00418 725 aaKnown RBP13.46□□□□□ -0.25
CCDC7-202ENST00000302316 CNPP09543 421 aaKnown RBP13.46□□□□□ -0.25
CCDC7-202ENST00000302316 CCR1P32246 355 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 EIF4EBP2Q13542 120 aaPredicted RBP13.46□□□□□ -0.25
CCDC7-202ENST00000302316 ZNF638Q14966 1978 aaKnown RBP13.46□□□□□ -0.25
CCDC7-202ENST00000302316 OASLQ15646 514 aaKnown RBP13.46□□□□□ -0.25
CCDC7-202ENST00000302316 TAF12Q16514 161 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 C9orf50Q5SZB4 431 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 SEC14L1Q92503 715 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 ABHD8Q96I13 439 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 TCF25Q9BQ70 676 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 OLA1Q9NTK5 396 aaKnown RBP13.46□□□□□ -0.25
CCDC7-202ENST00000302316 ASIC3Q9UHC3 531 aa13.46□□□□□ -0.25
CCDC7-202ENST00000302316 CXCL14O95715 111 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 ZFXP17010 805 aaPredicted RBP13.46□□□□□ -0.26
CCDC7-202ENST00000302316 EIF3EP60228 445 aaKnown RBP13.46□□□□□ -0.26
CCDC7-202ENST00000302316 TWF1Q12792 350 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 EFEMP1Q12805 493 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 PTK6Q13882 451 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 NOMO1Q15155 1222 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 BRMS1LQ5PSV4 323 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 BEND6Q5SZJ8 279 aaPredicted RBP13.46□□□□□ -0.26
CCDC7-202ENST00000302316 TCEAL8Q8IYN2 117 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 PDZD8Q8NEN9 1154 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 C17orf80Q9BSJ5 609 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.26
CCDC7-202ENST00000302316 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 ARHGEF38Q9NXL2 777 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 MAFFQ9ULX9 164 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 LZTS1Q9Y250 596 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 SNX24Q9Y343 169 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 HEY1Q9Y5J3 304 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 INSL5Q9Y5Q6 135 aa13.46□□□□□ -0.26
CCDC7-202ENST00000302316 FAM72CH0Y354 149 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 ITGAVP06756 1048 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 ADH1AP07327 375 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 ZDHHC11BP0C7U3 371 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 MYOGP15173 224 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 AMPD1P23109 780 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 C10orf120Q5SQS8 335 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 FAM72AQ5TYM5 149 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 FAM72DQ6L9T8 149 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms