RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SIX1Q15475 284 aaPredicted RBP14.49□□□□□ -0.09
SDC2-201ENST00000302190 TMEM259Q4ZIN3 620 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 HSP90AA5PQ58FG0 334 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 KRT80Q6KB66 452 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 METTL7BQ6UX53 244 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 BBS12Q6ZW61 710 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 ARMCX2Q7L311 632 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 IFNEQ86WN2 208 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 COLGALT1Q8NBJ5 622 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 ICA1LQ8NDH6 482 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 SERAC1Q96JX3 654 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 SPATC1LQ9H0A9 340 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 CDT1Q9H211 546 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 PRMT7Q9NVM4 692 aaPredicted RBP14.49□□□□□ -0.09
SDC2-201ENST00000302190 TM9SF1O15321 606 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 CYP1A1P04798 512 aaPredicted RBP14.49□□□□□ -0.09
SDC2-201ENST00000302190 VDRP11473 427 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 GNL1P36915 607 aaPredicted RBP14.49□□□□□ -0.09
SDC2-201ENST00000302190 COPAP53621 1224 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 TPI1P60174 286 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 TRMT10BQ6PF06 316 aaKnown RBP14.49□□□□□ -0.09
SDC2-201ENST00000302190 IYDQ6PHW0 289 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 C12orf50Q8NA57 414 aaPredicted RBP14.49□□□□□ -0.09
SDC2-201ENST00000302190 IPMKQ8NFU5 416 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 MARK4Q96L34 752 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 TMEM109Q9BVC6 243 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 ZNF518BQ9C0D4 1074 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 LMCD1Q9NZU5 365 aa14.49□□□□□ -0.09
SDC2-201ENST00000302190 PRR5-ARHGAP8B1AHC4 643 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 GRIN3BO60391 1043 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 DNAJC6O75061 913 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 CSPG5O95196 566 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 ITGAVP06756 1048 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 GRIA1P42261 906 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 ARHGAP8P85298 464 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 MAP7Q14244 749 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 CMC1Q7Z7K0 106 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 EDEM1Q92611 657 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 SNRNP25Q9BV90 132 aaKnown RBP14.48□□□□□ -0.09
SDC2-201ENST00000302190 FSD1LQ9BXM9 530 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 WASF2Q9Y6W5 498 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 MYO18AQ92614 2054 aaKnown RBP14.48□□□□□ -0.09
SDC2-201ENST00000302190 GOLGA8CPA6NN73 597 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 GIPC1O14908 333 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 PMPCBO75439 489 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 LINGO3P0C6S8 592 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 ACO1P21399 889 aaKnown RBP14.48□□□□□ -0.09
SDC2-201ENST00000302190 RABGGTBP53611 331 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 NME5P56597 212 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 PDE1CQ14123 709 aaPredicted RBP14.48□□□□□ -0.09
SDC2-201ENST00000302190 MAP3K21Q5TCX8 1036 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 VWA5B1Q5TIE3 1220 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 TFB1MQ8WVM0 346 aaKnown RBP14.48□□□□□ -0.09
SDC2-201ENST00000302190 OPTNQ96CV9 577 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 SLC10A4Q96EP9 437 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 TRPV6Q9H1D0 765 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 SETD4Q9NVD3 440 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 C2CD2Q9Y426 696 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 DPPA5A6NC42 116 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 ACKR2O00590 384 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 HBP1O60381 514 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 MTA2O94776 668 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 CELF2O95319 508 aaKnown RBP14.48□□□□□ -0.09
SDC2-201ENST00000302190 NCAM1P13591 858 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 ETS2P15036 469 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 TGM2P21980 687 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 CNGA3Q16281 694 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 RNF220Q5VTB9 566 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 DPY19L2P1Q6NXN4 242 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 SPATA6LQ8N4H0 392 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 PTPRN2Q92932 1015 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 TWNKQ96RR1 684 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 ACO2Q99798 780 aaKnown RBP14.48□□□□□ -0.09
SDC2-201ENST00000302190 VCX3AQ9NNX9 186 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 RABGEF1Q9UJ41 708 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 STAP1Q9ULZ2 295 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 PLA2G4CQ9UP65 541 aa14.48□□□□□ -0.09
SDC2-201ENST00000302190 SPDYE16A6NNV3 312 aaPredicted RBP14.47□□□□□ -0.09
SDC2-201ENST00000302190 M0QZ92 97 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 EEF2KO00418 725 aaKnown RBP14.47□□□□□ -0.09
SDC2-201ENST00000302190 C6orf222P0C671 652 aaPredicted RBP14.47□□□□□ -0.09
SDC2-201ENST00000302190 SLC34A1Q06495 639 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 DYNC1I2Q13409 638 aaKnown RBP14.47□□□□□ -0.09
SDC2-201ENST00000302190 KIF19Q2TAC6 998 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 RAB6CQ53S08 254 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 TRIM67Q6ZTA4 783 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 STRA8Q7Z7C7 330 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 STKLD1Q8NE28 680 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 GSTCDQ8NEC7 633 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 HASPINQ8TF76 798 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 RAB6CQ9H0N0 254 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 PFDN4Q9NQP4 134 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 NMRK1Q9NWW6 199 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 DDIT4Q9NX09 232 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 NUDT5Q9UKK9 219 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 AK5Q9Y6K8 562 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 ZPBP2Q6X784 338 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 EXOC8Q8IYI6 725 aa14.47□□□□□ -0.09
SDC2-201ENST00000302190 TRIML2Q8N7C3 387 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms