RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 COX4I1P13073 169 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 KCNJ11Q14654 390 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 KCTD21Q4G0X4 260 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 KLC3Q6P597 504 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 SNX32Q86XE0 403 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 MCPH1Q8NEM0 835 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 ATP2A3Q93084 1043 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 TMA16Q96EY4 203 aaKnown RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 DCUN1D5Q9BTE7 237 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 CCDC28BQ9BUN5 200 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 TMEM39BQ9GZU3 492 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 GNEQ9Y223 722 aaKnown RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 NFASCO94856 1347 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 PRPSAP2O60256 369 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 DNAJA2O60884 412 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 PENKP01210 267 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 TYK2P29597 1187 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 SH3BGRP55822 239 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 TMEM259Q4ZIN3 620 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CMC1Q7Z7K0 106 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 JADE3Q92613 823 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CGRRF1Q99675 332 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CCT7Q99832 543 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CYP26B1Q9NR63 512 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 FIS1Q9Y3D6 152 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 M0QYV0 167 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CCNT2O60583 730 aaKnown RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 DGAT1O75907 488 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 STAMBPO95630 424 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 ITGBL1O95965 494 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 ERBB2P04626 1255 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CDK4P11802 303 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 EMC2Q15006 297 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 MAVSQ7Z434 540 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 FAM160B2Q86V87 743 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CAND1Q86VP6 1230 aaKnown RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 LENG8Q96PV6 779 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 PEBP4Q96S96 227 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 KCNK16Q96T55 309 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 SEPT10Q9P0V9 454 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 PAK5Q9P286 719 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 PPME1Q9Y570 386 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 CCDC78A2IDD5 438 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 SPAG6O75602 509 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 PDGFRAP16234 1089 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 MAGEA10P43363 369 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 BAATQ14032 418 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-201ENST00000300527 PLEKHG4BQ96PX9 1271 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 BTBD7Q9P203 1132 aa15.12■□□□□ 0.01
COL6A2-201ENST00000300527 SLC15A5A6NIM6 579 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 BOLA2-SMG1P6H3BVE0 249 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ICAM1P05362 532 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 SETSIPP0DME0 302 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 PRAMEP78395 509 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 NCAPG2Q86XI2 1143 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 BHLHE22Q8NFJ8 381 aaPredicted RBP15.11■□□□□ 0.01
COL6A2-201ENST00000300527 TMIGD2Q96BF3 282 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 PDCD2LQ9BRP1 358 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 SIKE1Q9BRV8 207 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 RSAD1Q9HA92 442 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 NDUFA13Q9P0J0 144 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 FEM1BQ9UK73 627 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 SSX2IPQ9Y2D8 614 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 HMX2A2RU54 273 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ZBTB14O43829 449 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 SNNO75324 88 aaPredicted RBP15.11■□□□□ 0.01
COL6A2-201ENST00000300527 LYPLA2O95372 231 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 RALBP11234 206 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 XRCC1P18887 633 aaPredicted RBP15.11■□□□□ 0.01
COL6A2-201ENST00000300527 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
COL6A2-201ENST00000300527 CAP2P40123 477 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 DCTN2Q13561 401 aaKnown RBP15.11■□□□□ 0.01
COL6A2-201ENST00000300527 DACT2Q5SW24 774 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 FAM91A1Q658Y4 838 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 PODNQ7Z5L7 613 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 MCF2L2Q86YR7 1114 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ACTRT2Q8TDY3 377 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 CLEC4DQ8WXI8 215 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ERLEC1Q96DZ1 483 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 DHX35Q9H5Z1 703 aaKnown RBP15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ZDHHC7Q9NXF8 308 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ARHGAP10A1A4S6 786 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 METTL18O95568 372 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 FAM58BPP0C7Q3 252 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 SFNP31947 248 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 HSD17B4P51659 736 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 TAP1Q03518 808 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 SLC9B1Q4ZJI4 515 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 SH3D19Q5HYK7 790 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ATG14Q6ZNE5 492 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 ZNF513Q8N8E2 541 aaPredicted RBP15.11■□□□□ 0.01
COL6A2-201ENST00000300527 C1orf21Q9H246 121 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 TMEM216Q9P0N5 145 aa15.11■□□□□ 0.01
COL6A2-201ENST00000300527 H3BNX3 289 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 TRUB2O95900 331 aaKnown RBP15.1■□□□□ 0.01
COL6A2-201ENST00000300527 EDN1P05305 212 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 TFPTP0C1Z6 253 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms