RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 C6orf52Q5T4I8 152 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 CYP4A22Q5TCH4 519 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 MROH9Q5TGP6 573 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 ZFP1Q6P2D0 407 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 TRMT1LQ7Z2T5 733 aaKnown RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 AMIGO2Q86SJ2 522 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 CAND1Q86VP6 1230 aaKnown RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 KIAA0319LQ8IZA0 1049 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 TMEM35BQ8NCS4 154 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 ZNF518BQ9C0D4 1074 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 DEFB129Q9H1M3 183 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 IFT122Q9HBG6 1241 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 PRPF19Q9UMS4 504 aaKnown RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 ZMPSTE24O75844 475 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 STAM2O75886 525 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 SERPINE1P05121 402 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 RFC1P35251 1148 aaPredicted RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 HOXD12P35452 270 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 SERPINB9P50453 376 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 NLRP11P59045 1033 aaKnown RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 CNTN2Q02246 1040 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 TKFCQ3LXA3 575 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 SLC44A4Q53GD3 710 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 UNC5AQ6ZN44 842 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 WDTC1Q8N5D0 677 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 INO80BQ9C086 356 aaPredicted RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 TRPV5Q9NQA5 729 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 PNPOQ9NVS9 261 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 UTP6Q9NYH9 597 aaKnown RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 KAT6AQ92794 2004 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 SLC15A5A6NIM6 579 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 ALDH3B2P48448 385 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 HSD17B4P51659 736 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PSMD7P51665 324 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 SOX10P56693 466 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 DARS2Q6PI48 645 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 POTEHQ6S545 545 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 LILRA2Q8N149 483 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 CMASQ8NFW8 434 aaPredicted RBP13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 FNIP1Q8TF40 1166 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 XPNPEP1Q9NQW7 623 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 RAB6BQ9NRW1 208 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 HERC5Q9UII4 1024 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 TDRKHQ9Y2W6 561 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 UBIAD1Q9Y5Z9 338 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 BOLA2-SMG1P6H3BVE0 249 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 ZBTB14O43829 449 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PORP16435 677 aaPredicted RBP13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 ARRB2P32121 409 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 MAGEA6P43360 314 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PCLAFQ15004 111 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 VWA5B1Q5TIE3 1220 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 TRMT10BQ6PF06 316 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PACS1Q6VY07 963 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PATL1Q86TB9 770 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 JOSD2Q8TAC2 188 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PPP4R1Q8TF05 950 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 KBTBD7Q8WVZ9 684 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 LRRC39Q96DD0 335 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 HAUS8Q9BT25 410 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 NACA2Q9H009 215 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 COL20A1Q9P218 1284 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 PAK5Q9P286 719 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 ZNF541Q9H0D2 1346 aa13.92□□□□□ -0.18
RPUSD4-201ENST00000298317 A0A1B0GTW7 788 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 KANSL1LA0AUZ9 987 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 DCXO43602 365 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 THRAP10827 490 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 NCF2P19878 526 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 KCNA4P22459 653 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 MRPS22P82650 360 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 GSTM4Q03013 218 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 KLF10Q13118 480 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 N4BP2L1Q5TBK1 243 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 C16orf46Q6P387 395 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 NPNTQ6UXI9 565 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 CHERPQ8IWX8 916 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 KCTD6Q8NC69 237 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 GSDMBQ8TAX9 411 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 PLGRKTQ9HBL7 147 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 HOMER2Q9NSB8 354 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 TBC1D22BQ9NU19 505 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 FAF1Q9UNN5 650 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 PRSS51A0A1B0GVH4 220 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 TRIM43BA6NCK2 446 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 TMEM247A6NEH6 219 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 PLIN3O60664 434 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 DKC1O60832 514 aaKnown RBP eCLIP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 GLRA3O75311 464 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 ITGBL1O95965 494 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 GRK2P25098 689 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 CNTFP26441 200 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 ACOT2P49753 483 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 FSCBQ5H9T9 825 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 RTP4Q96DX8 246 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 SERPINI1Q99574 410 aa13.91□□□□□ -0.18
RPUSD4-201ENST00000298317 TRIM56Q9BRZ2 755 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms