RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PTPN9P43378 593 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 PURAQ00577 322 aaKnown RBP12.19□□□□□ -0.46
RHO-201ENST00000296271 E2F5Q15329 346 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 KLHL38Q2WGJ6 581 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 EDEM1Q92611 657 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 ARHGEF4Q9NR80 690 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 GDAP2Q9NXN4 497 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
RHO-201ENST00000296271 HMX2A2RU54 273 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 KCNK1O00180 336 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 LPXNO60711 386 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 INHBAP08476 426 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 SETSIPP0DME0 302 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 KCNE1P15382 129 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 BGNP21810 368 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 ZNF157P51786 506 aaPredicted RBP12.19□□□□□ -0.46
RHO-201ENST00000296271 NR1H3Q13133 447 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 SLC45A4Q5BKX6 768 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
RHO-201ENST00000296271 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 TBC1D31Q96DN5 1066 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 RTP4Q96DX8 246 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 SIGLEC10Q96LC7 697 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 KRT82Q9NSB4 513 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
RHO-201ENST00000296271 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 FZD10Q9ULW2 581 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 ST3GAL5Q9UNP4 418 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 CDY2AQ9Y6F7 541 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 WDR27A2RRH5 827 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 USP12O75317 370 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 CBX6O95503 412 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 CD4P01730 458 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 USP17L7P0C7H9 530 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 MATKP42679 507 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 TKTL1P51854 596 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 IRX4P78413 519 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 AP1B1Q10567 949 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 MROH9Q5TGP6 573 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 GDF6Q6KF10 455 aaPredicted RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 ZNF449Q6P9G9 518 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 STKLD1Q8NE28 680 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 ZMIZ2Q8NF64 920 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 SENP8Q96LD8 212 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 DUSP16Q9BY84 665 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 ULBP1Q9BZM6 244 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 KLC2Q9H0B6 622 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 AGO3Q9H9G7 860 aaKnown RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 RXFP1Q9HBX9 757 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 HAO1Q9UJM8 370 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 SCNN1GP51170 649 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 CRYBB1P53674 252 aaPredicted RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 SESN2P58004 480 aaPredicted RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 CAP1Q01518 475 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 GNASQ5JWF2 1037 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 LIMS2Q7Z4I7 341 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 APBB1IPQ7Z5R6 666 aaPredicted RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 CCNYQ8ND76 341 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 C10orf82Q8WW14 230 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 KLHL29Q96CT2 875 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 SMOQ99835 787 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
RHO-201ENST00000296271 L3MBTL1Q9Y468 752 aa12.18□□□□□ -0.46
RHO-201ENST00000296271 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 CHRNA1P02708 482 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 NPR3P17342 541 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 NBPF20Q3BBV1 942 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 SLC25A52Q3SY17 297 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 SV2CQ496J9 727 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 HEATR6Q6AI08 1181 aaKnown RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 NME8Q8N427 588 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 SLC7A14Q8TBB6 771 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 USP6NLQ92738 828 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 UTP4Q969X6 686 aaKnown RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 PCED1BQ96HM7 432 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 ZNF560Q96MR9 790 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 AGAP3Q96P47 875 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 TMEM209Q96SK2 561 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 HNRNPABQ99729 332 aaKnown RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 STARD13Q9Y3M8 1113 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 IKBKGQ9Y6K9 419 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 A0A0G2JND7 137 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 POMCP01189 267 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 T-ENOLP0DO92 83 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 NQO1P15559 274 aaKnown RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 PSMB4P28070 264 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms