RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 MAP3K7CLP57077 242 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 LILRA4P59901 499 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 OLIG2Q13516 323 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 GPR162Q16538 588 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 MDH1BQ5I0G3 518 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 TTC39BQ5VTQ0 682 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 HFE2Q6ZVN8 426 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 PDCD7Q8N8D1 485 aaKnown RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 N4BP2L2Q92802 583 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 UPF1Q92900 1129 aaKnown RBP eCLIP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 PHACTR1Q9C0D0 580 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 ZNF395Q9H8N7 513 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 LRRC4Q9HBW1 653 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 ARHGEF3Q9NR81 526 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 FBXO6Q9NRD1 293 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 TXLNGQ9NUQ3 528 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 MARCOQ9UEW3 520 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 MCM8Q9UJA3 840 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 SMIM35A0A1B0GVV1 85 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 E2F8A0AVK6 867 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 M0QYT0 321 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 DCTN3O75935 186 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 F7P08709 466 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 KITP10721 976 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 PSEN2P49810 448 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 ACCSLQ4AC99 568 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 SYPL2Q5VXT5 272 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 RGS9BPQ6ZS82 235 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 DEPDC1BQ8WUY9 529 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 ALKBH8Q96BT7 664 aaKnown RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 LBHD1Q9BQE6 289 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 MRPL42Q9Y6G3 142 aaKnown RBP16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 NUP205Q92621 2012 aa16.34■□□□□ 0.21
NCKIPSD-201ENST00000294129 WDR27A2RRH5 827 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 KRT37O76014 449 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 APOEP02649 317 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 PTPN9P43378 593 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 FAM110CQ1W6H9 321 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 WLSQ5T9L3 541 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 CES3Q6UWW8 571 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 ANKRD23Q86SG2 305 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 ZNF276Q8N554 614 aa16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 TFB1MQ8WVM0 346 aaKnown RBP16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 PRR11Q96HE9 360 aaPredicted RBP16.33■□□□□ 0.21
NCKIPSD-201ENST00000294129 SNRPAP09012 282 aaKnown RBP16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 EZRP15311 586 aaKnown RBP16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 SERPINB4P48594 390 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 UBXN11Q5T124 520 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 ZNF534Q76KX8 674 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 ASRGL1Q7L266 308 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 ZDHHC17Q8IUH5 632 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 SIX6OS1Q8N1H7 587 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 RNF169Q8NCN4 708 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 HTR3CQ8WXA8 447 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 LPPQ93052 612 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 AGAP3Q96P47 875 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 TRIM55Q9BYV6 548 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 HEY2Q9UBP5 337 aa16.33■□□□□ 0.2
NCKIPSD-201ENST00000294129 IQCA1LA6NCM1 817 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 KCNK1O00180 336 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 HOXD8P13378 290 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SV2CQ496J9 727 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 PAN2Q504Q3 1202 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 ANKRD20A2Q5SQ80 823 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 ANKRD20A1Q5TYW2 823 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 ANKRD20A3Q5VUR7 823 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 CRYBG2Q8N1P7 616 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 STK32AQ8WU08 396 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 UTP4Q969X6 686 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 RTP4Q96DX8 246 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 TNIP3Q96KP6 325 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 CAPN9O14815 690 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 EPHB2P29323 1055 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 MATKP42679 507 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 NEK3P51956 506 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SLC8A3P57103 927 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 COLGALT1Q8NBJ5 622 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 VPS11Q9H270 941 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SSU72Q9NP77 194 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 ARHGEF4Q9NR80 690 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 GNEQ9Y223 722 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SPAG6O75602 509 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 ALADP13716 330 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 CCNB1P14635 433 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 ELF1P32519 619 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SPRYD7Q5W111 196 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 ZCCHC23Q6ZST2 131 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 NDUFAF2Q8N183 169 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SMG8Q8ND04 991 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SLC7A14Q8TBB6 771 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 SIGLEC10Q96LC7 697 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 QKIQ96PU8 341 aaKnown RBP eCLIP16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 KCNK16Q96T55 309 aa16.32■□□□□ 0.2
NCKIPSD-201ENST00000294129 I3L4J1 428 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 RNF103O00237 685 aa16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 XPOTO43592 962 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-201ENST00000294129 USP12O75317 370 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms