RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GADD45BO75293 160 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-201ENST00000291552 CALCAP01258 141 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 CHKAP35790 457 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 SLC8A3P57103 927 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 STIM1Q13586 685 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 BYSLQ13895 437 aaKnown RBP26.41■■□□□ 1.82
U2AF1-201ENST00000291552 MORC3Q14149 939 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 TRIP4Q15650 581 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-201ENST00000291552 PEAR1Q5VY43 1037 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-201ENST00000291552 TMEM270Q6UE05 265 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 PIWIL1Q96J94 861 aaKnown RBP26.41■■□□□ 1.82
U2AF1-201ENST00000291552 LRRC4Q9HBW1 653 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 HESX1Q9UBX0 185 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 EVLQ9UI08 416 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-201ENST00000291552 STRIP2Q9ULQ0 834 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 RNF225M0QZC1 329 aaPredicted RBP26.4■■□□□ 1.82
U2AF1-201ENST00000291552 KCNK5O95279 499 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 SETSIPP0DME0 302 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 ITPKAP23677 461 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 CCDC40Q4G0X9 1142 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 SPDYCQ5MJ68 293 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 LYSMD4Q5XG99 296 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 LCLAT1Q6UWP7 414 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 CPXM2Q8N436 756 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 RBBP8NLQ8NC74 664 aaPredicted RBP26.4■■□□□ 1.82
U2AF1-201ENST00000291552 NELFBQ8WX92 580 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 EDEM1Q92611 657 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 PLD4Q96BZ4 506 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 NT5C1BQ96P26 610 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 CTNND2Q9UQB3 1225 aa26.4■■□□□ 1.82
U2AF1-201ENST00000291552 GFRA2O00451 464 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 PAEPP09466 180 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 PMLP29590 882 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 TRIM61Q5EBN2 209 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 BSPRYQ5W0U4 402 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 SYT12Q8IV01 421 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 FMNL3Q8IVF7 1028 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 ARHGEF19Q8IW93 802 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 DEFB119Q8N690 84 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 KCTD13Q8WZ19 329 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 TMEM9BQ9NQ34 198 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 SFMBT1Q9UHJ3 866 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 PILRBQ9UKJ0 227 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 CYP8B1Q9UNU6 501 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 STON1Q9Y6Q2 735 aa26.39■■□□□ 1.82
U2AF1-201ENST00000291552 PCNX2A6NKB5 2137 aa26.39■■□□□ 1.81
U2AF1-201ENST00000291552 BIN1O00499 593 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 PPP1R2P41236 205 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 RGS7P49802 495 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 DAOAP59103 153 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 RPL6Q02878 288 aaKnown RBP26.38■■□□□ 1.81
U2AF1-201ENST00000291552 ENPP2Q13822 863 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 PMF1Q6P1K2 205 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 FOXR2Q6PJQ5 311 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 SCML4Q8N228 414 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 MRGPRX1Q96LB2 322 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 OLA1Q9NTK5 396 aaKnown RBP26.38■■□□□ 1.81
U2AF1-201ENST00000291552 THAP10Q9P2Z0 257 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-201ENST00000291552 KIAA1257Q9ULG3 409 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.38■■□□□ 1.81
U2AF1-201ENST00000291552 PCDHB4Q9Y5E5 795 aa26.38■■□□□ 1.81
U2AF1-201ENST00000291552 FRYQ5TBA9 3013 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 GIPC1O14908 333 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 MSI1O43347 362 aaKnown RBP26.37■■□□□ 1.81
U2AF1-201ENST00000291552 BRD2P25440 801 aaKnown RBP26.37■■□□□ 1.81
U2AF1-201ENST00000291552 IL12RB1P42701 662 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 TMEM215Q68D42 235 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 SDE2Q6IQ49 451 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 PSAPL1Q6NUJ1 521 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 SLC41A1Q8IVJ1 513 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 TRIM59Q8IWR1 403 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 SIX6OS1Q8N1H7 587 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 PPM1KQ8N3J5 372 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 SLC35F5Q8WV83 523 aa26.37■■□□□ 1.81
U2AF1-201ENST00000291552 IPO9Q96P70 1041 aaKnown RBP26.37■■□□□ 1.81
U2AF1-201ENST00000291552 HBS1LQ9Y450 684 aaKnown RBP26.37■■□□□ 1.81
U2AF1-201ENST00000291552 NUMA1Q14980 2115 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 AP5Z1O43299 807 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 LCP1P13796 627 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 HOXD9P28356 352 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-201ENST00000291552 ZNF132P52740 706 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 STX17P56962 302 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 SLC36A4Q6YBV0 504 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 ANKS1BQ7Z6G8 1248 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 CLEC4CQ8WTT0 213 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 CNGB3Q9NQW8 809 aa26.36■■□□□ 1.81
U2AF1-201ENST00000291552 M0QYV0 167 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 PIK3R2O00459 728 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 P4HA2O15460 535 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 FUT11Q495W5 492 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 MSANTD2Q6P1R3 559 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 SLC23A3Q6PIS1 610 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 RRAGAQ7L523 313 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 SORCS1Q8WY21 1168 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 KREMEN1Q96MU8 473 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 FSCN3Q9NQT6 498 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 STOML2Q9UJZ1 356 aa26.35■■□□□ 1.81
U2AF1-201ENST00000291552 TSPAN3O60637 253 aa26.34■■□□□ 1.81
U2AF1-201ENST00000291552 ZNF217O75362 1048 aa26.34■■□□□ 1.81
U2AF1-201ENST00000291552 NOVA1P51513 510 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms