RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 OGDHLQ9ULD0 1010 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 MFHAS1Q9Y4C4 1052 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 HACD1B0YJ81 288 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 I6L893 689 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 TNFRSF10BO14763 440 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 MFSD11O43934 449 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 DGKIO75912 1065 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 F9P00740 461 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 IGLV3-25P01717 112 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 LSP1P33241 339 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 ADRA1BP35368 520 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 MMP13P45452 471 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 OR1G1P47890 313 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 CXCR3P49682 368 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 IFI35P80217 286 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 BASP1P80723 227 aaKnown RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 RNASELQ05823 741 aaKnown RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 PDIA2Q13087 525 aaKnown RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 TCTN1Q2MV58 587 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 FNBP1LQ5T0N5 605 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 SPATA2LQ8IUW3 424 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 ZBED8Q8IZ13 594 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 CRIPAKQ8N1N5 446 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 CASD1Q96PB1 797 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 WDR83Q9BRX9 315 aaKnown RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 ANLNQ9NQW6 1124 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 XPO7Q9UIA9 1087 aaKnown RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 ZMYND8Q9ULU4 1186 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 CLUHO75153 1309 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 SYNJ2BP-COX16A0A087WUM0 186 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 GOLGA8MH3BSY2 632 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 DCLK1O15075 740 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 TRAPPC3O43617 180 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 GCATO75600 419 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 MAP3K6O95382 1288 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 TSHRP16473 764 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 PAFAH1B3Q15102 231 aaKnown RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 PRKD1Q15139 912 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 MSS51Q4VC12 460 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 BSPRYQ5W0U4 402 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 TTC19Q6DKK2 380 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 RFX8Q6ZV50 586 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 TAC4Q86UU9 113 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 CCDC13Q8IYE1 715 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 RIBC1Q8N443 379 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 ADAM32Q8TC27 787 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 FUBP3Q96I24 572 aaKnown RBP eCLIP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 DEFB118Q96PH6 123 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 FAM193BQ96PV7 902 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 DDIT4Q9NX09 232 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 MARCH5Q9NX47 278 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 COX16Q9P0S2 106 aa10.54□□□□□ -0.72
C9orf43-201ENST00000288462 PRG3Q9Y2Y8 225 aaPredicted RBP10.54□□□□□ -0.72
C9orf43-201ENST00000288462 C5orf60A6NFR6 353 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 EEF2KO00418 725 aaKnown RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 CDH16O75309 829 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 BANF1O75531 89 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 AMHP03971 560 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 OR4Q2P0C623 313 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 ATP5DP30049 168 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 HCAR3P49019 387 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 ZNF135P52742 658 aaPredicted RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 SLC5A3P53794 718 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 EIF4EBP2Q13542 120 aaPredicted RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 MTFR1Q15390 333 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 ZSCAN26Q16670 478 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 SLC39A12Q504Y0 691 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 PPP1R21Q6ZMI0 780 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 BZW1Q7L1Q6 419 aaKnown RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 TDRPQ86YL5 185 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 DCP1BQ8IZD4 617 aaKnown RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 ABI1Q8IZP0 508 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 TAB3Q8N5C8 712 aaPredicted RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 ATP11CQ8NB49 1132 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 DQX1Q8TE96 717 aaKnown RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 EDEM1Q92611 657 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 CCDC77Q9BR77 488 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 COLEC11Q9BWP8 271 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 FRMD8Q9BZ67 464 aaPredicted RBP10.53□□□□□ -0.72
C9orf43-201ENST00000288462 PPCSQ9HAB8 311 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 RAB6BQ9NRW1 208 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 CTNNAL1Q9UBT7 734 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 ADAM28Q9UKQ2 775 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 PCDHB7Q9Y5E2 793 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 LTBP2Q14767 1821 aa10.53□□□□□ -0.72
C9orf43-201ENST00000288462 E7EVH7 732 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 FAM72CH0Y354 149 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 HOXA2O43364 376 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 CXCL10P02778 98 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 VAV1P15498 845 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 GCAP28676 217 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 GATMP50440 423 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 GPX6P59796 221 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 MRPL58Q14197 206 aaKnown RBP10.52□□□□□ -0.72
C9orf43-201ENST00000288462 RASA2Q15283 850 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 NFE2Q16621 373 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms