RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GRK4P32298 578 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 TUSC3Q13454 348 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 MBTPS1Q14703 1052 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 EFHC2Q5JST6 749 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 STRADAQ7RTN6 431 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 CTAGE3PQ8IX95 158 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 THOC1Q96FV9 657 aaKnown RBP18.58■□□□□ 0.56
CAPN1-201ENST00000279247 SMARCD1Q96GM5 515 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 B3GALT6Q96L58 329 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 PGLYRP2Q96PD5 576 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 TSPAN18Q96SJ8 248 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 NPY6RQ99463 290 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 ELAC2Q9BQ52 826 aaKnown RBP18.58■□□□□ 0.56
CAPN1-201ENST00000279247 KCNK1O00180 336 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 LTFP02788 710 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 STX2P32856 288 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 PTK7Q13308 1070 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 TNFAIP8L3Q5GJ75 292 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 ARHGEF18Q6ZSZ5 1173 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 CEP128Q6ZU80 1094 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 KLC2Q9H0B6 622 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 SIK2Q9H0K1 926 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
CAPN1-201ENST00000279247 TCP11X1B4DZS4 312 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 I6L893 689 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-201ENST00000279247 MYO1CO00159 1063 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 EEF2KO00418 725 aaKnown RBP18.57■□□□□ 0.56
CAPN1-201ENST00000279247 RPL9P32969 192 aaKnown RBP18.57■□□□□ 0.56
CAPN1-201ENST00000279247 ARPP19P56211 112 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 CRADDP78560 199 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 MRPL10Q7Z7H8 261 aaKnown RBP18.57■□□□□ 0.56
CAPN1-201ENST00000279247 PGBD4Q96DM1 585 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 CABS1Q96KC9 395 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 ABI2Q9NYB9 513 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-201ENST00000279247 DNAJB4Q9UDY4 337 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 GGT7Q9UJ14 662 aa18.57■□□□□ 0.56
CAPN1-201ENST00000279247 DDHD2O94830 711 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 VAV1P15498 845 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 RPL34P49207 117 aaKnown RBP18.56■□□□□ 0.56
CAPN1-201ENST00000279247 DSC3Q14574 896 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 SLC45A4Q5BKX6 768 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 RELL1Q8IUW5 271 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 AGGF1Q8N302 714 aaeCLIP18.56■□□□□ 0.56
CAPN1-201ENST00000279247 RSPH1Q8WYR4 309 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 TRABDQ9H4I3 376 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 NKIRAS1Q9NYS0 192 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 HCSTQ9UBK5 93 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 RABGEF1Q9UJ41 708 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 ZNF623O75123 536 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 GRIK1P39086 918 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 NUMBP49757 651 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 RAB27AP51159 221 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 GRIK3Q13003 919 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 KCNJ11Q14654 390 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 MAP3K21Q5TCX8 1036 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 LHX8Q68G74 356 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 GLB1LQ6UWU2 654 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 VPS52Q8N1B4 723 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 GPR152Q8TDT2 470 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 PAFAH2Q99487 392 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 FGFR1OP2Q9NVK5 253 aa18.56■□□□□ 0.56
CAPN1-201ENST00000279247 SRGAP2BP0DMP2 458 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 PBX3P40426 434 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 LIG3P49916 1009 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 NUGGCQ68CJ6 796 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 CASC4Q6P4E1 433 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 CD300LGQ6UXG3 332 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 CDKL3Q8IVW4 592 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-201ENST00000279247 SEC16BQ96JE7 1060 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 AGAP3Q96P47 875 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 UNC93B1Q9H1C4 597 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 CYLDQ9NQC7 956 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 FAM155BO75949 473 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 ABHD2P08910 425 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 DRD4P21917 467 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 PHBP35232 272 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 GATMP50440 423 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 OLIG2Q13516 323 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 TRIM71Q2Q1W2 868 aaKnown RBP18.55■□□□□ 0.56
CAPN1-201ENST00000279247 KBTBD12Q3ZCT8 623 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 INTS6LQ5JSJ4 861 aaKnown RBP18.55■□□□□ 0.56
CAPN1-201ENST00000279247 GKAP1Q5VSY0 366 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-201ENST00000279247 SMYD5Q6GMV2 418 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 TFB1MQ8WVM0 346 aaKnown RBP18.55■□□□□ 0.56
CAPN1-201ENST00000279247 KCTD13Q8WZ19 329 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 MAML1Q92585 1016 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 HMX1Q9NP08 348 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-201ENST00000279247 WDR91A4D1P6 747 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 KIAA0754O94854 1291 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 CA4P22748 312 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 PGFP49763 221 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 GEMIN4P57678 1058 aaKnown RBP18.55■□□□□ 0.56
CAPN1-201ENST00000279247 FAM47EQ6ZV65 393 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 MPP5Q8N3R9 675 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 NCAPGQ9BPX3 1015 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 PRDM12Q9H4Q4 367 aa18.55■□□□□ 0.56
CAPN1-201ENST00000279247 TET1Q8NFU7 2136 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 A0A1W2PQ45 241 aaPredicted RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 A0A1W2PQY0 241 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 H3BRJ5 948 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms