RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 CICQ96RK0 1608 aaPredicted RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 SEPT4O43236 478 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 SOAT2O75908 522 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 AARSP49588 968 aaKnown RBP eCLIP14.11□□□□□ -0.15
NPC1-201ENST00000269228 PHEXP78562 749 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 PTAR1Q7Z6K3 402 aaPredicted RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 BAP1Q92560 729 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 MANSC1Q9H8J5 431 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 WWOXQ9NZC7 414 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 OR12D3Q9UGF7 316 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 TUBGCP4Q9UGJ1 667 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 RNF103O00237 685 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 TIMM44O43615 452 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 TAF11Q15544 211 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 AGAP9Q5VTM2 703 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 SLAIN1Q8ND83 568 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 ZSWIM2Q8NEG5 633 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 PAFAH2Q99487 392 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 DHX33Q9H6R0 707 aaKnown RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 ZSCAN5CA6NGD5 496 aaPredicted RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 KCNA4P22459 653 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 GLRBP48167 497 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 ARHGDIAP52565 204 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 MTA1Q13330 715 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 TMCO4Q5TGY1 634 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 LRRC8EQ6NSJ5 796 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 CCDC149Q6ZUS6 474 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 NECAB2Q7Z6G3 386 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 SPATA20Q8TB22 786 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 ANKRD7Q92527 254 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 SHCBP1LQ9BZQ2 653 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 C10orf88Q9H8K7 445 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 SMIM28A0A1B0GU29 152 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 TRIM16O95361 564 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 STMN1P16949 149 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 KDELR1P24390 212 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 TUSC3Q13454 348 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 RGS9BPQ6ZS82 235 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 KIRREL3Q8IZU9 778 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 PIP4K2CQ8TBX8 421 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 MAF1Q9H063 256 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 MSRAQ9UJ68 235 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 SELPP16109 830 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 NR2C2P49116 596 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 PSMD5Q16401 504 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 HECTD3Q5T447 861 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 C9orf57Q5W0N0 161 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 ZFP42Q96MM3 310 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 CORO1BQ9BR76 489 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 FAM167BQ9BTA0 163 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 YIPF2Q9BWQ6 316 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 NDE1Q9NXR1 346 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 USP15Q9Y4E8 981 aaPredicted RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 SUPT7LO94864 414 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 LUC7L3O95232 432 aaKnown RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 GLP2RO95838 553 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 PBLDP30039 288 aaPredicted RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 HDAC4P56524 1084 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 ZNF473Q8WTR7 871 aaKnown RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 MRPL45Q9BRJ2 306 aaKnown RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 PCDHA2Q9Y5H9 948 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 CARNS1A5YM72 827 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 NCF1BA6NI72 391 aaPredicted RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 NCF1CA8MVU1 366 aaPredicted RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 NCF1P14598 390 aaPredicted RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 HDCP19113 662 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 ARL2P36404 184 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 CDH17Q12864 832 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 SFSWAPQ12872 951 aaKnown RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 DDR2Q16832 855 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 TRIM48Q8IWZ4 208 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 ASPSCR1Q9BZE9 553 aa14.1□□□□□ -0.15
NPC1-201ENST00000269228 SAE1Q9UBE0 346 aaPredicted RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 RUVBL2Q9Y230 463 aaKnown RBP14.1□□□□□ -0.15
NPC1-201ENST00000269228 PCDH8O95206 1070 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 MZF1P28698 734 aaPredicted RBP14.09□□□□□ -0.15
NPC1-201ENST00000269228 ZNF143P52747 638 aaPredicted RBP14.09□□□□□ -0.15
NPC1-201ENST00000269228 SEC24CP53992 1094 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 JAG1P78504 1218 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 DNAJC3Q13217 504 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 MPP3Q13368 585 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 AADACL2Q6P093 401 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 TSHZ1Q6ZSZ6 1077 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 CACUL1Q86Y37 369 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 KATNAL2Q8IYT4 538 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 SEMA4DQ92854 862 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 CHST7Q9NS84 486 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 ARHGAP28Q9P2N2 729 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 APOC4-APOC2K7ER74 178 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 APOC2P02655 101 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 RBL1P28749 1068 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 LSP1P33241 339 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 ERFP50548 548 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 CCL14Q16627 93 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 PPP1R26Q5T8A7 1209 aaPredicted RBP14.09□□□□□ -0.15
NPC1-201ENST00000269228 RASIP1Q5U651 963 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms