RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TMC3Q7Z5M5 1100 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 NUP93Q8N1F7 819 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 LZTR1Q8N653 840 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 UCMAQ8WVF2 138 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 CDK5RAP1Q96SZ6 601 aaKnown RBP15.85■□□□□ 0.13
TIMP3-201ENST00000266085 ZNF214Q9UL59 606 aaPredicted RBP15.85■□□□□ 0.13
TIMP3-201ENST00000266085 SNX5Q9Y5X3 404 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 ABCC6O95255 1503 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 KLRG2A4D1S0 409 aaPredicted RBP15.85■□□□□ 0.13
TIMP3-201ENST00000266085 PRR23AA6NEV1 266 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 TRPC5OSA6NMA1 111 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 FMO1Q01740 532 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 ICE2Q659A1 982 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 KCNT2Q6UVM3 1135 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 C12orf56Q8IXR9 622 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 KIF2BQ8N4N8 673 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 LRRN4CLQ8ND94 238 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 FAM136AQ96C01 138 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 COG4Q9H9E3 785 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 NAALADL1Q9UQQ1 740 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 SIGLEC16A6NMB1 481 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 FKTNO75072 461 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 CRTAMO95727 393 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 AMHP03971 560 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 SERPIND1P05546 499 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 ZBTB48P10074 688 aaPredicted RBP15.85■□□□□ 0.13
TIMP3-201ENST00000266085 OR1E1P30953 314 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 CLK2P49760 499 aaKnown RBP15.85■□□□□ 0.13
TIMP3-201ENST00000266085 MAMLD1Q13495 774 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 CXorf38Q8TB03 319 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 NSL1Q96IY1 281 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 HSFY1Q96LI6 401 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 BRD8Q9H0E9 1235 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 CHST7Q9NS84 486 aa15.85■□□□□ 0.13
TIMP3-201ENST00000266085 CASZ1Q86V15 1759 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 ARHGAP10A1A4S6 786 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 RIPK2O43353 540 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 ZNF862O60290 1169 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 NPR3P17342 541 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 CATSPER1Q8NEC5 780 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 MAGEB18Q96M61 343 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 MFSD14AQ96MC6 490 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 NXF3Q9H4D5 531 aaKnown RBP15.84■□□□□ 0.13
TIMP3-201ENST00000266085 KCND1Q9NSA2 647 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 TMEM88BA6NKF7 163 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 NOS2P35228 1153 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 CDH17Q12864 832 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 RETSATQ6NUM9 610 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 RRM2BQ7LG56 351 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 BSNDQ8WZ55 320 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 TKTL2Q9H0I9 626 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 KIF17Q9P2E2 1029 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 CHD2O14647 1828 aaKnown RBP15.84■□□□□ 0.13
TIMP3-201ENST00000266085 MAGEB16A2A368 324 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 RCCD1A6NED2 376 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 O00370 1275 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 GRM5P41594 1212 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 GLRBP48167 497 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 IRF2BP2Q7Z5L9 587 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 SNX31Q8N9S9 440 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 B3GALNT2Q8NCR0 500 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 WNT8BQ93098 351 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 ATXN3LQ9H3M9 355 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 TBC1D13Q9NVG8 400 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 KCPQ6ZWJ8 1503 aa15.84■□□□□ 0.13
TIMP3-201ENST00000266085 SOWAHBA6NEL2 793 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 TSPAN3O60637 253 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 RTN3O95197 1032 aaPredicted RBP15.83■□□□□ 0.13
TIMP3-201ENST00000266085 NLRP9Q7RTR0 991 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 ADGRE3Q9BY15 652 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 FZD9O00144 591 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 MMP3P08254 477 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 CPA2P48052 419 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 POU6F1Q14863 301 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 SGO1Q5FBB7 561 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 NOMO2Q5JPE7 1267 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 ZSWIM2Q8NEG5 633 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 HELQQ8TDG4 1101 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 TEX12Q9BXU0 123 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 SCUBE2Q9NQ36 999 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 FAM105AQ9NUU6 356 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 WWOXQ9NZC7 414 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 HEY2Q9UBP5 337 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 DPP7Q9UHL4 492 aa15.83■□□□□ 0.13
TIMP3-201ENST00000266085 AFDNP55196 1824 aaKnown RBP15.83■□□□□ 0.12
TIMP3-201ENST00000266085 ITGALP20701 1170 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 EEF1DP29692 281 aaKnown RBP15.83■□□□□ 0.12
TIMP3-201ENST00000266085 MARSP56192 900 aaKnown RBP15.83■□□□□ 0.12
TIMP3-201ENST00000266085 MTA1Q13330 715 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 RRP1BQ14684 758 aaKnown RBP15.83■□□□□ 0.12
TIMP3-201ENST00000266085 FBXW10Q5XX13 1052 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 HERC6Q8IVU3 1022 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 RFWD2Q8NHY2 731 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 CCDC90BQ9GZT6 254 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 ATP13A1Q9HD20 1204 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 PIH1D1Q9NWS0 290 aaKnown RBP15.83■□□□□ 0.12
TIMP3-201ENST00000266085 TRHDEQ9UKU6 1024 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 RUVBL2Q9Y230 463 aaKnown RBP15.83■□□□□ 0.12
TIMP3-201ENST00000266085 H3BQF6 201 aa15.83■□□□□ 0.12
TIMP3-201ENST00000266085 KRT16P08779 473 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms