RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NUMBP49757 651 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 OCRLQ01968 901 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 FAM160B1Q5W0V3 765 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 ZNF534Q76KX8 674 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 TTC30AQ86WT1 665 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 HPS6Q86YV9 775 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 C10orf107Q8IVU9 208 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 CCDC185Q8N715 623 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 STX18Q9P2W9 335 aaKnown RBP17.36■□□□□ 0.37
SQLE-201ENST00000265896 TRIP11Q15643 1979 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 CAPN14A8MX76 684 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 GABBR2O75899 941 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 GOT1P17174 413 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 MGAT1P26572 445 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 SDC4P31431 198 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 SERPINB6P35237 376 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 EFNA5P52803 228 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 SLC10A6Q3KNW5 377 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
SQLE-201ENST00000265896 CHSY1Q86X52 802 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 PHTF2Q8N3S3 785 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 MCRS1Q96EZ8 462 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 PAK5Q9P286 719 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 KCNK1O00180 336 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 CCDC130P13994 396 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 PAPOLAP51003 745 aaKnown RBP17.35■□□□□ 0.37
SQLE-201ENST00000265896 AP1B1Q10567 949 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 MTMR14Q8NCE2 650 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 SSU72Q9NP77 194 aaKnown RBP17.35■□□□□ 0.37
SQLE-201ENST00000265896 NDE1Q9NXR1 346 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 MYOCOSA0A1B0GUC4 107 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 ACKR2O00590 384 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 PFKMP08237 780 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 ZNF286BP0CG31 522 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 HDAC4P56524 1084 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 ITGA9Q13797 1035 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 TEX44Q53QW1 395 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 IER5Q5VY09 327 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 RNF111Q6ZNA4 994 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 TMPRSS6Q8IU80 811 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 ZNF398Q8TD17 642 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 MARK4Q96L34 752 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 SIGLEC10Q96LC7 697 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 HOXC10Q9NYD6 342 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 TAGLN3Q9UI15 199 aa17.35■□□□□ 0.37
SQLE-201ENST00000265896 DCXO43602 365 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 CREB3O43889 395 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 RNASEH1O60930 286 aaKnown RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 BPGMP07738 259 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 TFDP2Q14188 446 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 ZNF618Q5T7W0 954 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 RASIP1Q5U651 963 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 IL31Q6EBC2 164 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 OR6B3Q8NGW1 331 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 FAM149B1Q96BN6 582 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 KIF12Q96FN5 646 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 WWP1Q9H0M0 922 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 LHX5Q9H2C1 402 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 NME7Q9Y5B8 376 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 PAPSS1O43252 624 aaPredicted RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 OPHN1O60890 802 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 KRT38O76015 456 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 LMNAP02545 664 aaKnown RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 ALDOAP04075 364 aaKnown RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 SARNPP82979 210 aaKnown RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 MBTD1Q05BQ5 628 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 ATG16L1Q676U5 607 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 MAVSQ7Z434 540 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 NME8Q8N427 588 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 C18orf25Q96B23 403 aaPredicted RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 GPR20Q99678 358 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 UBP1Q9NZI7 540 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 CACNG4Q9UBN1 327 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 E7ENQ6 273 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 CHADO15335 359 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 PEX2P28328 305 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 IRX1P78414 480 aaPredicted RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 PDE1CQ14123 709 aaPredicted RBP17.34■□□□□ 0.37
SQLE-201ENST00000265896 TAZQ16635 292 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 VCXQ9H320 206 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 NRDE2Q9H7Z3 1164 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 KCNK4Q9NYG8 393 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 TMEM216Q9P0N5 145 aa17.34■□□□□ 0.37
SQLE-201ENST00000265896 NFKBIEO00221 500 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 DNAJC6O75061 913 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 ASPHQ12797 758 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 CDC16Q13042 620 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 ARMC3Q5W041 872 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 METTL7BQ6UX53 244 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 ILDR2Q71H61 639 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 PNPLA1Q8N8W4 532 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 GBP5Q96PP8 586 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 CCDC106Q9BWC9 280 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 PTPRHQ9HD43 1115 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 KLK14Q9P0G3 267 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 EMCNQ9ULC0 261 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 PLA2G4CQ9UP65 541 aa17.33■□□□□ 0.37
SQLE-201ENST00000265896 FER1L6Q2WGJ9 1857 aa17.33■□□□□ 0.36
SQLE-201ENST00000265896 IGKV6D-21A0A0A0MT36 114 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms