RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CYP1A2P05177 515 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 PRDX6P30041 224 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 EIF3EP60228 445 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 MS4A2Q01362 244 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 SPP2Q13103 211 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 NME3Q13232 169 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 ADGRE1Q14246 886 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 MYO1HQ8N1T3 1032 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 CCDC89Q8N998 374 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 BORCS5Q969J3 196 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 TMEM117Q9H0C3 514 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 RPF2Q9H7B2 306 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 GIN1Q9NXP7 522 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 DNMT3BQ9UBC3 853 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 SAE1Q9UBE0 346 aaPredicted RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 SLC24A2Q9UI40 661 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 PSMD13Q9UNM6 376 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 KIAA1551Q9HCM1 1747 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 H3BMQ9 156 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 PSMD11O00231 422 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 MTA2O94776 668 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 XRCC1P18887 633 aaPredicted RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 AOC1P19801 751 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 ETFBP38117 255 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 RPL26P61254 145 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 ARHGAP4P98171 946 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 OTUD4Q01804 1114 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 RNASEH2BQ5TBB1 312 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 KCNT2Q6UVM3 1135 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 TMEM26Q6ZUK4 368 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 RFPL4BQ6ZWI9 263 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 SETD3Q86TU7 594 aaPredicted RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 FBXO11Q86XK2 927 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 FBXW8Q8N3Y1 598 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 PCYOX1LQ8NBM8 494 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 THAP11Q96EK4 314 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 WNK4Q96J92 1243 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 COG8Q96MW5 612 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 TRIM56Q9BRZ2 755 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 SPON1Q9HCB6 807 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 SSU72Q9NP77 194 aaKnown RBP9.05□□□□□ -0.96
VAPB-201ENST00000265619 GINM1Q9NU53 330 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 PCDHA12Q9UN75 941 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 SMCHD1A6NHR9 2005 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 GTPBP10A4D1E9 387 aaKnown RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 NOTOA8MTQ0 251 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ZBTB5O15062 677 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 CALUO43852 315 aaPredicted RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 MT-ND3P03897 115 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SERPINA6P08185 405 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 CCDC130P13994 396 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ZNF182P17025 639 aaPredicted RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 GMPRP36959 345 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 TRPC1P48995 793 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 TGFB2P61812 414 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SELENBP1Q13228 472 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 IRF5Q13568 498 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 RNF19BQ6ZMZ0 732 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PRR23BQ6ZRT6 265 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 FAM156AQ8NDB6 213 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 EME1Q96AY2 570 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ITPKCQ96DU7 683 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 KLHL32Q96NJ5 620 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 IDI2Q9BXS1 227 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SLC13A1Q9BZW2 595 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
VAPB-201ENST00000265619 POLIQ9UNA4 740 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 C10orf71Q711Q0 1435 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ROBO3Q96MS0 1386 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PNMA6FA0A0J9YX94 578 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 TNFRSF10AO00220 468 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 CSPG5O95196 566 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 S100BP04271 92 aaPredicted RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 ZNF12P17014 697 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ARRB2P32121 409 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 NR4A2P43354 598 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 IREB2P48200 963 aaKnown RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 PRELPP51888 382 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 NUP107P57740 925 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 MYL7Q01449 175 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 GPR107Q5VW38 600 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SYDE1Q6ZW31 735 aaPredicted RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 IGFN1Q86VF2 1251 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 TTC30AQ86WT1 665 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 CATSPER3Q86XQ3 398 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 CLIP4Q8N3C7 705 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 FBXO36Q8NEA4 188 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 FAM110BQ8TC76 370 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 FAM151AQ8WW52 585 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 DHX38Q92620 1227 aaKnown RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 VTI1AQ96AJ9 217 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 APOPT1Q96IL0 206 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 CTRCQ99895 268 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 TMEM121Q9BTD3 319 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 RABL2AQ9UBK7 228 aaPredicted RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 KLQ9UEF7 1012 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 MOSPD1Q9UJG1 213 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SLC27A5Q9Y2P5 690 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 COL4A5P29400 1685 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms