RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 RPL10AP62906 217 aaKnown RBP10.36□□□□□ -0.75
SEC22C-201ENST00000264454 USP41Q3LFD5 358 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 C6orf118Q5T5N4 469 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 RNASEH2BQ5TBB1 312 aaKnown RBP10.36□□□□□ -0.75
SEC22C-201ENST00000264454 AGBL2Q5U5Z8 902 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 PPP1R21Q6ZMI0 780 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 NECAB2Q7Z6G3 386 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 ZC3H18Q86VM9 953 aaKnown RBP10.36□□□□□ -0.75
SEC22C-201ENST00000264454 CCDC25Q86WR0 208 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 UNC45BQ8IWX7 931 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 FAM76AQ8TAV0 307 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 RNF139Q8WU17 664 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 TTC25Q96NG3 672 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 EPAS1Q99814 870 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 CCDC77Q9BR77 488 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 BRD8Q9H0E9 1235 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 OSBPL2Q9H1P3 480 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 SEMA4AQ9H3S1 761 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 TMBIM4Q9HC24 238 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 GOLGA6AQ9NYA3 693 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 CALCOCO1Q9P1Z2 691 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 STK39Q9UEW8 545 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 HEY1Q9Y5J3 304 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 BACE2Q9Y5Z0 518 aa10.36□□□□□ -0.75
SEC22C-201ENST00000264454 HTTP42858 3142 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 SYNJ2BP-COX16A0A087WUM0 186 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 FAM92AA1XBS5 289 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 KIAA0355O15063 1070 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 TTC4O95801 387 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 EFEMP2O95967 443 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 IGLV3-25P01717 112 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 OR4Q2P0C623 313 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 SLC2A3P11169 496 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 CPB1P15086 417 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 GOT1P17174 413 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 RPL22P35268 128 aaKnown RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 PITX1P78337 314 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 ZNF844Q08AG5 666 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 CBLBQ13191 982 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 SEMA3BQ13214 749 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 MTA1Q13330 715 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 EIF4EBP2Q13542 120 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 SLC29A2Q14542 456 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 PPP2R5DQ14738 602 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 PAFAH1B3Q15102 231 aaKnown RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 PDK1Q15118 436 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 SLC45A4Q5BKX6 768 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 ACBD5Q5T8D3 534 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 EMC10Q5UCC4 262 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 NPNTQ6UXI9 565 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 CENPUQ71F23 418 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 TMEM199Q8N511 208 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 FAM71DQ8N9W8 422 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 SCAMP5Q8TAC9 235 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 DQX1Q8TE96 717 aaKnown RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 DIS3LQ8TF46 1054 aaKnown RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 RIN2Q8WYP3 895 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 EDEM1Q92611 657 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 RNF34Q969K3 372 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 EXOC4Q96A65 974 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 PAWRQ96IZ0 340 aaKnown RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 ATP6V1G3Q96LB4 118 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 HAPLN3Q96S86 360 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 STMN4Q9H169 189 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 SMOC2Q9H3U7 446 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 CWH43Q9H720 699 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 USP29Q9HBJ7 922 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 ARHGEF4Q9NR80 690 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 AAASQ9NRG9 546 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 OLA1Q9NTK5 396 aaKnown RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 PSD3Q9NYI0 1048 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 COX16Q9P0S2 106 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 HSFX1Q9UBD0 423 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 ADAM21Q9UKJ8 722 aa10.35□□□□□ -0.75
SEC22C-201ENST00000264454 FARP1Q9Y4F1 1045 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-201ENST00000264454 COL4A4P53420 1690 aaPredicted RBP10.34□□□□□ -0.75
SEC22C-201ENST00000264454 MTMR11A4FU01 709 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 C5orf60A6NFR6 353 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 PPP1R12AO14974 1030 aaPredicted RBP10.34□□□□□ -0.75
SEC22C-201ENST00000264454 CHADO15335 359 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 KCNN4O15554 427 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 IRAK2O43187 625 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 CREB3O43889 395 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 GCATO75600 419 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 STK10O94804 968 aaKnown RBP10.34□□□□□ -0.75
SEC22C-201ENST00000264454 BAIAP3O94812 1187 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 UPP2O95045 317 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 ZSCAN5DPP0CG00 497 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 HAPLN1P10915 354 aaPredicted RBP10.34□□□□□ -0.75
SEC22C-201ENST00000264454 ETS1P14921 441 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 TSHRP16473 764 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 AMPD1P23109 780 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 YWHAQP27348 245 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 CCR1P32246 355 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 SERPINB6P35237 376 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 MAGEA4P43358 317 aa10.34□□□□□ -0.75
SEC22C-201ENST00000264454 TUFMP49411 452 aaKnown RBP10.34□□□□□ -0.75
SEC22C-201ENST00000264454 RABGGTBP53611 331 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms