RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CEP19Q96LK0 163 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 BRD8Q9H0E9 1235 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 HAO1Q9UJM8 370 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 SUFUQ9UMX1 484 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 SLC4A7Q9Y6M7 1214 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 BDNFP23560 247 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 GRK2P25098 689 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 IRF2BP2Q7Z5L9 587 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 GPAMQ9HCL2 828 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 PIH1D1Q9NWS0 290 aaKnown RBP14.38□□□□□ -0.11
CDH3-201ENST00000264012 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 YDJCA8MPS7 323 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDH3-201ENST00000264012 C15orf59Q2T9L4 293 aaPredicted RBP14.38□□□□□ -0.11
CDH3-201ENST00000264012 PGBD3Q8N328 593 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 APBB2Q92870 758 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 FAR2Q96K12 515 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 OLFM3Q96PB7 478 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 NCANO14594 1321 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 BTNL10A8MVZ5 291 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 SEC24DO94855 1032 aaPredicted RBP14.38□□□□□ -0.11
CDH3-201ENST00000264012 USP17L7P0C7H9 530 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 YWHAQP27348 245 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 RBL1P28749 1068 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 RENBPP51606 427 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 IFI35P80217 286 aaPredicted RBP14.38□□□□□ -0.11
CDH3-201ENST00000264012 TREML2Q5T2D2 321 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 WSCD1Q658N2 575 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 ZNF662Q6ZS27 426 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 TMC7Q7Z402 723 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 TSEN2Q8NCE0 465 aaKnown RBP14.38□□□□□ -0.11
CDH3-201ENST00000264012 FGFBP2Q9BYJ0 223 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 ENTPD7Q9NQZ7 604 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 GLP2RO95838 553 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 SERPINF2P08697 491 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 PTPN1P18031 435 aaKnown RBP14.38□□□□□ -0.11
CDH3-201ENST00000264012 PBX1P40424 430 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 SCNN1GP51170 649 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 TAGAPQ8N103 731 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 LZTR1Q8N653 840 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 TRHDEQ9UKU6 1024 aa14.38□□□□□ -0.11
CDH3-201ENST00000264012 WDR27A2RRH5 827 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 RBP1P09455 135 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 ITGALP20701 1170 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 MGAT1P26572 445 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 GP5P40197 560 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 MLH1P40692 756 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 MARSP56192 900 aaKnown RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 CSHL1Q14406 222 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 LRRC38Q5VT99 294 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 EEF1DP3Q658K8 133 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 ANKS3Q6ZW76 656 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 GPR142Q7Z601 462 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 PTAR1Q7Z6K3 402 aaPredicted RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 CLPBQ9H078 707 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 IKZF4Q9H2S9 585 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 C10orf88Q9H8K7 445 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 B4GALT5O43286 388 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 ZSCAN5DPP0CG00 497 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 FLOT2Q14254 428 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 SEL1L3Q68CR1 1132 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 CDK5RAP1Q96SZ6 601 aaKnown RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 NMRK2Q9NPI5 230 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 GEMIN8Q9NWZ8 242 aaKnown RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 SAE1Q9UBE0 346 aaPredicted RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 NCF1BA6NI72 391 aaPredicted RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 NCF1CA8MVU1 366 aaPredicted RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 C5orf58C9J3I9 102 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 CCNE2O96020 404 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 GJB1P08034 283 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 NCF1P14598 390 aaPredicted RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 OCA2Q04671 838 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 KRT72Q14CN4 511 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 KBTBD12Q3ZCT8 623 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 PKN3Q6P5Z2 889 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 ZCCHC9Q8N567 271 aaKnown RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 EIF1ADQ8N9N8 165 aaKnown RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 DNAJC9Q8WXX5 260 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 ADGRE3Q9BY15 652 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 CHCHD3Q9NX63 227 aaKnown RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 HACD1B0YJ81 288 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 RNF225M0QZC1 329 aaPredicted RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 OR1E1P30953 314 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 SLC20A2Q08357 652 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 DPYSL3Q14195 570 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 MTDHQ86UE4 582 aaKnown RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 HERC6Q8IVU3 1022 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 C12orf56Q8IXR9 622 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 ABTB1Q969K4 478 aaPredicted RBP14.37□□□□□ -0.11
CDH3-201ENST00000264012 PGM2Q96G03 612 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 NCKIPSDQ9NZQ3 722 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 RIPK3Q9Y572 518 aa14.37□□□□□ -0.11
CDH3-201ENST00000264012 NOS2P35228 1153 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 SERPINB5P36952 375 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 SCTRP47872 440 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 MARCKSL1P49006 195 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms