RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 CC2D1AQ6P1N0 951 aaPredicted RBP25.36■■□□□ 1.65
SCN1B-201ENST00000262631 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.36■■□□□ 1.65
SCN1B-201ENST00000262631 ZSCAN18Q8TBC5 510 aaPredicted RBP25.36■■□□□ 1.65
SCN1B-201ENST00000262631 ADAMTS19Q8TE59 1207 aa25.36■■□□□ 1.65
SCN1B-201ENST00000262631 SLC39A13Q96H72 371 aa25.36■■□□□ 1.65
SCN1B-201ENST00000262631 PEBP4Q96S96 227 aa25.36■■□□□ 1.65
SCN1B-201ENST00000262631 PRDM6Q9NQX0 595 aa25.36■■□□□ 1.65
SCN1B-201ENST00000262631 TMPRSS4Q9NRS4 437 aa25.36■■□□□ 1.65
SCN1B-201ENST00000262631 PCSK1NQ9UHG2 260 aa25.36■■□□□ 1.65
SCN1B-201ENST00000262631 SOBPA7XYQ1 873 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 I6L893 689 aaPredicted RBP25.35■■□□□ 1.65
SCN1B-201ENST00000262631 MBTPS2O43462 519 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 IGLV3-27P01718 113 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 IL1R2P27930 398 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 GBP1P32455 592 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 CXCR3P49682 368 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 TBX4P57082 545 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 TAS2R40P59535 323 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 NNTQ13423 1086 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 SMAD4Q13485 552 aaKnown RBP25.35■■□□□ 1.65
SCN1B-201ENST00000262631 TXNRD3NBQ6F5E7 133 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 SCYL2Q6P3W7 929 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 ZSCAN30Q86W11 494 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 ST13P5Q8NFI4 369 aaPredicted RBP25.35■■□□□ 1.65
SCN1B-201ENST00000262631 RIN3Q8TB24 985 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 USP13Q92995 863 aaPredicted RBP25.35■■□□□ 1.65
SCN1B-201ENST00000262631 FCRL2Q96LA5 508 aaPredicted RBP25.35■■□□□ 1.65
SCN1B-201ENST00000262631 NECTIN4Q96NY8 510 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 LCMT1Q9UIC8 334 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 CDH7Q9ULB5 785 aa25.35■■□□□ 1.65
SCN1B-201ENST00000262631 FTCDO95954 541 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 F9P00740 461 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 PCK1P35558 622 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 CYP4V2Q6ZWL3 525 aaPredicted RBP25.34■■□□□ 1.65
SCN1B-201ENST00000262631 ARID3BQ8IVW6 561 aaPredicted RBP25.34■■□□□ 1.65
SCN1B-201ENST00000262631 CCDC185Q8N715 623 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 TTC16Q8NEE8 873 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 GDE1Q9NZC3 331 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 USP18Q9UMW8 372 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 ARHGAP26Q9UNA1 814 aa25.34■■□□□ 1.65
SCN1B-201ENST00000262631 HBS1LQ9Y450 684 aaKnown RBP25.34■■□□□ 1.65
SCN1B-201ENST00000262631 STC2O76061 302 aa25.33■■□□□ 1.65
SCN1B-201ENST00000262631 IRF1P10914 325 aa25.33■■□□□ 1.65
SCN1B-201ENST00000262631 SLC25A11Q02978 314 aaKnown RBP25.33■■□□□ 1.65
SCN1B-201ENST00000262631 TFF2Q03403 129 aa25.33■■□□□ 1.65
SCN1B-201ENST00000262631 FAM78AQ5JUQ0 283 aa25.33■■□□□ 1.65
SCN1B-201ENST00000262631 TDP1Q9NUW8 608 aa25.33■■□□□ 1.65
SCN1B-201ENST00000262631 ZMYM5Q9UJ78 669 aa25.33■■□□□ 1.65
SCN1B-201ENST00000262631 SCAMP3O14828 347 aaKnown RBP25.32■■□□□ 1.64
SCN1B-201ENST00000262631 SPOPO43791 374 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 DESP17661 470 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 SP100P23497 879 aaPredicted RBP25.32■■□□□ 1.64
SCN1B-201ENST00000262631 SLC1A1P43005 524 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 SSR1P43307 286 aaKnown RBP25.32■■□□□ 1.64
SCN1B-201ENST00000262631 COG7P83436 770 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 ZNF569Q5MCW4 686 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 NT5DC3Q86UY8 548 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 TRIM58Q8NG06 486 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 RNF34Q969K3 372 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 ASB16Q96NS5 453 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 MAGEB5Q9BZ81 275 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 WDCPQ9H6R7 721 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 XPO7Q9UIA9 1087 aaKnown RBP25.32■■□□□ 1.64
SCN1B-201ENST00000262631 PACSIN2Q9UNF0 486 aaPredicted RBP25.32■■□□□ 1.64
SCN1B-201ENST00000262631 KIF5CO60282 957 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 GREM1O60565 184 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 KLKB1P03952 638 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 CCR1P32246 355 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 GBP2P32456 591 aaPredicted RBP25.32■■□□□ 1.64
SCN1B-201ENST00000262631 RING1Q06587 406 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 SND1Q7KZF4 910 aaKnown RBP eCLIP25.32■■□□□ 1.64
SCN1B-201ENST00000262631 SH3RF2Q8TEC5 729 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 CD101Q93033 1021 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 ALS2CR12Q96Q35 445 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 TKTL2Q9H0I9 626 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 DENND4AQ7Z401 1863 aa25.32■■□□□ 1.64
SCN1B-201ENST00000262631 KCNU1A8MYU2 1149 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 TNNT1P13805 278 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 KPNA1P52294 538 aaPredicted RBP25.31■■□□□ 1.64
SCN1B-201ENST00000262631 PPP2R5DQ14738 602 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 SMTNL2Q2TAL5 461 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 LEXMQ3ZCV2 418 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 KCNT1Q5JUK3 1230 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 SYCE1Q8N0S2 351 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 SLC35F6Q8N357 371 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 ACSF2Q96CM8 615 aaPredicted RBP25.31■■□□□ 1.64
SCN1B-201ENST00000262631 RSPRY1Q96DX4 576 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 CFAP97Q9P2B7 532 aa25.31■■□□□ 1.64
SCN1B-201ENST00000262631 LEFTY2O00292 366 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 PRPSAP2O60256 369 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 MOCS2O96007 188 aaPredicted RBP25.3■■□□□ 1.64
SCN1B-201ENST00000262631 LAMP2P13473 410 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 VIPR2P41587 438 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 MARCKSL1P49006 195 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 ATP13A4Q4VNC1 1196 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 PEX26Q7Z412 305 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 SMARCD2Q92925 531 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 PLD4Q96BZ4 506 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 LRRC3BQ96PB8 259 aa25.3■■□□□ 1.64
SCN1B-201ENST00000262631 ZWILCHQ9H900 591 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms