RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GABRG3Q99928 467 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 ULBP1Q9BZM6 244 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 FSCN3Q9NQT6 498 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 TSPAN16Q9UKR8 245 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 AGO1Q9UL18 857 aaKnown RBP12.82□□□□□ -0.36
TRAF4-202ENST00000262396 PLA2G4CQ9UP65 541 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 USP3Q9Y6I4 520 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 TYW5A2RUC4 315 aaKnown RBP12.81□□□□□ -0.36
TRAF4-202ENST00000262396 WASH3PC4AMC7 463 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
TRAF4-202ENST00000262396 GREM1O60565 184 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 EPHX1P07099 455 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 CISD3P0C7P0 127 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 VDRP11473 427 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 OXTRP30559 389 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 PRCPP42785 496 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 ZNF132P52740 706 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 MFAP3P55082 362 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 PDE4CQ08493 712 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 ADIGQ0VDE8 80 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 FNDC3BQ53EP0 1204 aaKnown RBP12.81□□□□□ -0.36
TRAF4-202ENST00000262396 CACUL1Q86Y37 369 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 FMNL3Q8IVF7 1028 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 MINDY1Q8N5J2 469 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 UBA3Q8TBC4 463 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 SNX19Q92543 992 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 EDEM1Q92611 657 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 MRGPRX1Q96LB2 322 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 NT5C1BQ96P26 610 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 SLC6A17Q9H1V8 727 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 METTL14Q9HCE5 456 aaKnown RBP12.81□□□□□ -0.36
TRAF4-202ENST00000262396 ELOVL2Q9NXB9 296 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 SLC27A6Q9Y2P4 619 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 ZDHHC9Q9Y397 364 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
TRAF4-202ENST00000262396 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ACACBO00763 2458 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ARHGAP33O14559 1287 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 TIMM44O43615 452 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 KLKB1P03952 638 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 SETSIPP0DME0 302 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 NCAM1P13591 858 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 SPINK2P20155 84 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 PPP1R2P41236 205 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ZNF445P59923 1031 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 NUCB2P80303 420 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 LRRC63Q05C16 580 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 EIF4HQ15056 248 aaKnown RBP12.8□□□□□ -0.36
TRAF4-202ENST00000262396 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 FUT11Q495W5 492 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 CBWD6Q4V339 395 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ZCWPW2Q504Y3 356 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 CBWD3Q5JTY5 395 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 CBWD5Q5RIA9 395 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 FYB2Q5VWT5 728 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ANKRD40Q6AI12 368 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ISM2Q6H9L7 571 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 KLHL10Q6JEL2 608 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 UNQ6494/PRO21346Q6UXR6 183 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 TMPRSS6Q8IU80 811 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 PPM1KQ8N3J5 372 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ZNF276Q8N554 614 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 TMA16Q96EY4 203 aaKnown RBP12.8□□□□□ -0.36
TRAF4-202ENST00000262396 TOE1Q96GM8 510 aaKnown RBP12.8□□□□□ -0.36
TRAF4-202ENST00000262396 GPR174Q9BXC1 333 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 SLC2A11Q9BYW1 496 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 ABCC13Q9NSE7 274 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 SFMBT1Q9UHJ3 866 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 KIAA1257Q9ULG3 409 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 MYOFQ9NZM1 2061 aa12.8□□□□□ -0.36
TRAF4-202ENST00000262396 CNOT1A5YKK6 2376 aaKnown RBP12.8□□□□□ -0.36
TRAF4-202ENST00000262396 MYO16Q9Y6X6 1858 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 SPAARA0A1B0GVQ0 90 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-202ENST00000262396 PROS1P07225 676 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 MAOBP27338 520 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 IL12RB1P42701 662 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 SLC11A2P49281 568 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 RGS7P49802 495 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 HNRNPDQ14103 355 aaKnown RBP12.79□□□□□ -0.36
TRAF4-202ENST00000262396 ZNF234Q14588 700 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 BSPRYQ5W0U4 402 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 FAM124AQ86V42 546 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 CPXM2Q8N436 756 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 GANCQ8TET4 914 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 WFIKKN2Q8TEU8 576 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 NDRG1Q92597 394 aaKnown RBP12.79□□□□□ -0.36
TRAF4-202ENST00000262396 NUP58Q9BVL2 599 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 THAP10Q9P2Z0 257 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-202ENST00000262396 HBS1LQ9Y450 684 aaKnown RBP12.79□□□□□ -0.36
TRAF4-202ENST00000262396 CACNA1BQ00975 2339 aa12.79□□□□□ -0.36
TRAF4-202ENST00000262396 A0A1B0GTW7 788 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 H0Y626 953 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 M0QYV0 167 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 PIK3R2O00459 728 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 TRIM16O95361 564 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 ATP5BP06576 529 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms