RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 UBN1Q9NPG3 1134 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 MYO18AQ92614 2054 aaKnown RBP14.07□□□□□ -0.16
VMP1-201ENST00000262291 TMEM120BA0PK00 339 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 EIF4E1BA6NMX2 242 aaKnown RBP14.06□□□□□ -0.16
VMP1-201ENST00000262291 I6L893 689 aaPredicted RBP14.06□□□□□ -0.16
VMP1-201ENST00000262291 SDHAF4Q5VUM1 108 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 SLC9A4Q6AI14 798 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 LINC01599Q8WXQ3 324 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 STAMBPL1Q96FJ0 436 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 SERPINB12Q96P63 405 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 INTS9Q9NV88 658 aaKnown RBP14.06□□□□□ -0.16
VMP1-201ENST00000262291 HCSTQ9UBK5 93 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 NUDT5Q9UKK9 219 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 FZD10Q9ULW2 581 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 GMNCA6NCL1 334 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 DAB1O75553 588 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 DDHD2O94830 711 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 APRTP07741 180 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 GATMP50440 423 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ARL4CP56559 192 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 DPYSL2Q16555 572 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 AGGF1Q8N302 714 aaeCLIP14.06□□□□□ -0.16
VMP1-201ENST00000262291 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 B3GALT6Q96L58 329 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 TSPAN18Q96SJ8 248 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ROPN1BQ9BZX4 212 aaPredicted RBP14.06□□□□□ -0.16
VMP1-201ENST00000262291 ROPN1Q9HAT0 212 aaPredicted RBP14.06□□□□□ -0.16
VMP1-201ENST00000262291 SEPT10Q9P0V9 454 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ALOX15BO15296 676 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 TRAPPC3O43617 180 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 MFSD11O43934 449 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 METTL18O95568 372 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 FAM107AO95990 144 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ODC1P11926 461 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ELK3P41970 407 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 PGFP49763 221 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 DAOAP59103 153 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 PKN2Q16513 984 aaKnown RBP14.06□□□□□ -0.16
VMP1-201ENST00000262291 NCBP2-AS2Q69YL0 99 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 MFSD5Q6N075 450 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 VSTM1Q6UX27 236 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 C3orf62Q6ZUJ4 267 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ARMC2Q8NEN0 867 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ATXN2LQ8WWM7 1075 aaKnown RBP14.06□□□□□ -0.16
VMP1-201ENST00000262291 CFAP36Q96G28 342 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 ETNK1Q9HBU6 452 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 DTLQ9NZJ0 730 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 DNAJB4Q9UDY4 337 aa14.06□□□□□ -0.16
VMP1-201ENST00000262291 THSD7BQ9C0I4 1608 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 TDRD15B5MCY1 1934 aaKnown RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 A0A1W2PQ45 241 aaPredicted RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 A0A1W2PQY0 241 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 ZNF623O75123 536 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 UPP2O95045 317 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 BRAFP15056 766 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 TUSC3Q13454 348 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 TNFAIP8L3Q5GJ75 292 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 AP1ARQ63HQ0 302 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 SMYD5Q6GMV2 418 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 OVOS1Q6IE37 1185 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 C6orf89Q6UWU4 347 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 C4orf33Q8N1A6 199 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 TMEM86AQ8N2M4 240 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 NSMCE1Q8WV22 266 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 RSPH1Q8WYR4 309 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 NPY6RQ99463 290 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 DNAI2Q9GZS0 605 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 POPDC2Q9HBU9 364 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 STARD7Q9NQZ5 370 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 DDIT4Q9NX09 232 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 CDH9Q9ULB4 789 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 KLHL33A6NCF5 533 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 VAV1P15498 845 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 TGM2P21980 687 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 CST5P28325 142 aaPredicted RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 RPL9P32969 192 aaKnown RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 NOS2P35228 1153 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 GRIA1P42261 906 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 ZKSCAN8Q15776 578 aaPredicted RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 CLLU1OSQ5K130 101 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 PALM2Q8IXS6 379 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.05□□□□□ -0.16
VMP1-201ENST00000262291 FBF1Q8TES7 1133 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 RNF139Q8WU17 664 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 DEPDC1BQ8WUY9 529 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 HHIPL1Q96JK4 782 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 PAIP2Q9BPZ3 127 aaKnown RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 CCDC77Q9BR77 488 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 FRMD8P1Q9BZ68 369 aaPredicted RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 ARHGEF4Q9NR80 690 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 SPATS2LQ9NUQ6 558 aaKnown RBP14.05□□□□□ -0.16
VMP1-201ENST00000262291 L3MBTL1Q9Y468 752 aa14.05□□□□□ -0.16
VMP1-201ENST00000262291 A0A1W2PPM1 405 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 RASA4BC9J798 803 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 HHLA1C9JL84 531 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 RASA4O43374 803 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 ARL4AP40617 200 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 OR1G1P47890 313 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms