RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CLOCKO15516 846 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 VTNP04004 478 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 NR3C2P08235 984 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 TAF6P49848 677 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 RAD23AP54725 363 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PERM1Q5SV97 790 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 ADSSL1Q8N142 457 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 FAM172AQ8WUF8 416 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 VPS33AQ96AX1 596 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PRRG3Q9BZD7 231 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 ARMCX1Q9P291 453 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 RBMXL2O75526 392 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 UBOX5O94941 541 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 CPA3P15088 417 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 CCDC167Q9P0B6 97 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 MAFFQ9ULX9 164 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PZPP20742 1482 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 O00370 1275 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 GMFGO60234 142 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 SEMA3DO95025 777 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 ITGALP20701 1170 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 CENPCQ03188 943 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 SPANXN2Q5MJ10 180 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 MRGBPQ9NV56 204 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PTPRTO14522 1441 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 FOXP2O15409 715 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 CDC40O60508 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PABPC1P11940 636 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 RAG1P15918 1043 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PPIDQ08752 370 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 EDEM1Q92611 657 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 AHCYL2Q96HN2 611 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 EXTL3O43909 919 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ODC1P11926 461 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 FDFT1P37268 417 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 PIGKQ92643 395 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 SERPINB12Q96P63 405 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ABCG8Q9H221 673 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 TNKS2Q9H2K2 1166 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 A0A1W2PRG6 482 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 IL18RAPO95256 599 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 RHOCP08134 193 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 EXOSC10Q01780 885 aaKnown RBP12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZCCHC23Q6ZST2 131 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 SMPD4Q9NXE4 827 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 CCDC154A6NI56 674 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 RCVRNP35243 200 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 POLD2P49005 469 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ILDR2Q71H61 639 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 MAGEB18Q96M61 343 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 MSH3P20585 1137 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 SLFN11Q7Z7L1 901 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZNF605Q86T29 641 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 PEG10Q86TG7 708 aaKnown RBP12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ANKS1AQ92625 1134 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 NSMCE2Q96MF7 247 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 QKIQ96PU8 341 aaKnown RBP eCLIP12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 AAR2Q9Y312 384 aaKnown RBP12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 NTRK1P04629 796 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 GYPCP04921 128 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 CYP24A1Q07973 514 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ITGA9Q13797 1035 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 CAMK1Q14012 370 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 POM121L1PQ3SYA9 428 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 ACAD10Q6JQN1 1059 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 NOTUMQ6P988 496 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 DEFB128Q7Z7B8 93 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 UBE2OQ9C0C9 1292 aaKnown RBP12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 MID1IP1Q9NPA3 183 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 MCUBQ9NWR8 336 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 TRPM5Q9NZQ8 1165 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 CLEC4AQ9UMR7 237 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 VPS9D1Q9Y2B5 631 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 MAGI2Q86UL8 1455 aa12.75□□□□□ -0.37
ARFGEF1-201ENST00000262215 CASTOR2A6NHX0 329 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 H7C1W4 665 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 KPNA4O00629 521 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 KRT33AO76009 404 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 LTKP29376 864 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 PKNOX1P55347 436 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 NR1I3Q14994 352 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZIK1Q3SY52 487 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 KLHDC7AQ5VTJ3 777 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 FAM129BQ96TA1 746 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 CYB561D2O14569 222 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZNF189O75820 626 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 NDUFB10O96000 172 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 IDH2P48735 452 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms